Mercury(2+)
Everything that changed this flow. Back to the flow
7febc8b4-bd9f-4bba-9030-54e8e074de42
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| prefLabel | 3 | bootstrap_labels, normalize_name_case, substance_label_v1 | the substance's name: Mercury(2+) |
| altLabel | 2 | consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| cas_match_labels | 1 | consensus_match | group_key=mercury(ii)||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['pubchem']; cas_sources={'14302-87-5': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-26a13f8aea74ba1d: {'14302-87-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['14302-87-5']; matched_chebi_ids=[]; candidate_pubchem_cids=[26623]; selected_pubchem_cids=[26623]; formula_similarity_expected=['Hg']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,417 | bootstrap_labels | prefLabel | — | [{"@value":"mercury (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Bootstrapped prefLabel from legacy name field |
| 5,418 | bootstrap_labels | name | mercury (ii) | — | Purged legacy name field to enforce prefLabel usage |
| 5,419 | bootstrap_labels | synonyms | ["element in usetox"] | [] | Removed legacy synonyms field in favor of structured labels |
| 125,848 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 125,849 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 215,153 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,356 | normalize_name_case | prefLabel | [{"@value":"mercury (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | [{"@value":"Mercury (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 232,392 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1) |
| 232,393 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 232,394 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.730.414A","provenance":{"prov:wasGeneratedBy":"enrich_refer… | Added references with provenance; cas_numbers=['14302-87-5']; matched_chebi_ids=[]; candidate_pubchem_cids=[26623]; selected_pubchem_cids=[26623]; formula_similarity_expected=['Hg']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,817 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | rdkit_pre_consensus from '[Hg+2]'; added: molecular_mass, monoisotopic_mass |
| 268,606 | consensus_match | altLabel | [] | [{"@value":"Mercuric cation","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… | group_key=mercury(ii)||dimension=Environmental > media=Water > water_body=Surface water; cas=14302-87-5; added Common Chemistry CAS names as altLabel: Mercuric cation, Mercuric ion, Mercury (Hg<sup>2+</sup>), Mercury cation (Hg<sup>2+</sup>), Mercury dication, Mercury(2+), Mercury(II), Mercury(II) ion, Mercury, ion (Hg<sup>2+</sup>); object_uuid=fo-26a13f8aea74ba1d |
| 268,607 | consensus_match | cas_match_labels | — | {"14302-87-5":"exactMatch"} | group_key=mercury(ii)||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['pubchem']; cas_sources={'14302-87-5': ['pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-26a13f8aea74ba1d: {'14302-87-5': 'exactMatch'} |
| 274,975 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Mercury (ii)' |
| 281,451 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | rdkit_post_consensus from '[Hg+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,286 | dedupe_altlabels | altLabel | [{"@value":"Mercuric cation","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… | [{"@value":"Mercuric cation","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… | Deduplicated altLabel values and removed entries matching prefLabel |
| 343,948 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7febc8b4-bd9f-… | associations resolved on the elementary layer |
| 389,281 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | typed the way the ontology types it |
| 396,350 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/AtomCation"] | the substance's answer, copied onto its flow |
| 396,351 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Hg+2"],"at… | the substance's answer, copied onto its flow |
| 403,891 | substance_label_v1 | prefLabel | [{"@value":"Mercury (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | [{"@value":"Mercury(2+)","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"substance_label_v1","prov:wasAt… | the substance's name: Mercury(2+) |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1555490862250000/5417 | prefLabel | ef:agent/bootstrap_labels | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v0 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v1 |
| ef:activity/change/20260820T1555490862250000/5418 | name | ef:agent/bootstrap_labels | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v1 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v2 |
| ef:activity/change/20260820T1555490862250000/5419 | synonyms | ef:agent/bootstrap_labels | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v2 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v3 |
| ef:activity/change/20260820T1555490862250000/125848 | context | ef:agent/default_context_mapping | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v3 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v4 |
| ef:activity/change/20260820T1555490862250000/125849 | context_iri | ef:agent/default_context_mapping | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v4 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v5 |
| ef:activity/change/20260820T1555490862250000/215153 | unit_iri | ef:agent/unit_normalization | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v5 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v6 |
| ef:activity/change/20260820T1555490862250000/222356 | prefLabel | ef:agent/normalize_name_case | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v6 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v7 |
| ef:activity/change/20260820T1555490862250000/232392 | properties | ef:agent/enrich_references | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v7 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v8 |
| ef:activity/change/20260820T1555490862250000/232393 | skos_definition | ef:agent/enrich_references | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v8 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v9 |
| ef:activity/change/20260820T1555490862250000/232394 | references | ef:agent/enrich_references | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v9 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v10 |
| ef:activity/change/20260820T1555490862250000/249817 | properties | ef:agent/rdkit_pre_consensus | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v10 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v11 |
| ef:activity/change/20260820T1555490862250000/268606 | altLabel | ef:agent/consensus_match | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v11 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v12 |
| ef:activity/change/20260820T1555490862250000/268607 | cas_match_labels | ef:agent/consensus_match | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v12 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v13 |
| ef:activity/change/20260820T1555490862250000/274975 | properties | ef:agent/opsin_iupac | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v13 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v14 |
| ef:activity/change/20260820T1555490862250000/281451 | properties | ef:agent/rdkit_post_consensus | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v14 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v15 |
| ef:activity/change/20260820T1555490862250000/292286 | altLabel | ef:agent/dedupe_altlabels | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v15 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v16 |
| ef:activity/change/20260820T1555490862250000/343948 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v16 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v17 |
| ef:activity/change/20260820T1555490862250000/389281 | properties | ef:agent/normalise_property_values | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v17 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v18 |
| ef:activity/change/20260820T1555490862250000/396350 | types | ef:agent/link_flows_to_their_substance | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v18 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v19 |
| ef:activity/change/20260820T1555490862250000/396351 | properties | ef:agent/link_flows_to_their_substance | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v19 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v20 |
| ef:activity/change/20260820T1555490862250000/403891 | prefLabel | ef:agent/substance_label_v1 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v20 | ef:flow/7febc8b4-bd9f-4bba-9030-54e8e074de42/v21 |