Patulin
Everything that changed this flow. Back to the flow
80dae855-0135-4772-b0e6-0b5bca9a46a4
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 32951' (registry code), 'NSC 8120' (registry code) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=149-29-1; cc_chebi_agreed_name='Patulin'; object_uuid=fo-2d396488c056a561 |
| cas_match_labels | 1 | consensus_match | group_key=4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'149-29-1': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-2d396488c056a561: {'149-29-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['149-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_74926']; candidate_pubchem_cids=[4696]; selected_pubchem_cids=[4696]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 17,938 | bootstrap_labels | prefLabel | — | [{"@value":"4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… | Bootstrapped prefLabel from legacy name field |
| 17,939 | bootstrap_labels | name | 4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one | — | Purged legacy name field to enforce prefLabel usage |
| 17,940 | bootstrap_labels | synonyms | ["organic","4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one"] | [] | Removed legacy synonyms field in favor of structured labels |
| 126,324 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 126,325 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 219,213 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 243,983 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 243,984 | enrich_references | skos_definition | — | [{"@value":"A furopyran and lactone that is (2H-pyran-3(6H)-ylidene)acetic acid which is substituted by hydroxy groups… | Merged ChEBI/PubChem definitions into skos:definition |
| 243,985 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.963G","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['149-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_74926']; candidate_pubchem_cids=[4696]; selected_pubchem_cids=[4696]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,158 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | rdkit_pre_consensus from 'C1C=C2C(=CC(=O)O2)C(O1)O'; added: monoisotopic_mass |
| 256,744 | chebi_altlabels | altLabel | [] | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 262,421 | consensus_match | prefLabel | [{"@value":"4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… | [{"@value":"Patulin","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… | cas=149-29-1; cc_chebi_agreed_name='Patulin'; object_uuid=fo-2d396488c056a561 |
| 262,422 | consensus_match | altLabel | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | cas=149-29-1; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-2d396488c056a561 |
| 262,423 | consensus_match | altLabel | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | group_key=4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=149-29-1; added Common Chemistry CAS names as altLabel: 4<em>H</em>-Furo[3,2-<em>c</em>]pyran-2(6<em>H</em>)-one, 4-hydroxy-, <span class="text-smallcaps">DL</span>-Patulin, Acetic acid, (2,4-dihydroxy-2<em>H</em>-pyran-3(6<em>H</em>)-ylidene)-, 3,4-lactone, Clairformin, Expansin (antibiotic), Gigantin, Leucopin, MeSH ID: D010365, Mycoin, Mycoin C, NSC 32951, NSC 8120, Penicidin, Terinin; object_uuid=fo-2d396488c056a561 |
| 262,424 | consensus_match | cas_match_labels | — | {"149-29-1":"exactMatch"} | group_key=4,6-dihydro-4-hydroxy-2h-furo[3,2-c]pyran-2-one||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'149-29-1': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-2d396488c056a561: {'149-29-1': 'exactMatch'} |
| 278,364 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4,6-dihydro-4-hydroxy-2H-furo(3,2-c)pyran-2-one' |
| 285,121 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | rdkit_post_consensus from 'O=C1C=C2C(=CCOC2O)O1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,872 | strip_catalogue_altlabels | altLabel | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | [{"@value":"(2,4-dihydroxy-2H-pyran-3(6H)-ylidene)acetic acid, 3,4-lactone","@language":"en","source":{"prov:wasGenerat… | Removed 2 catalogue altLabel value(s): 'NSC 32951' (registry code), 'NSC 8120' (registry code) |
| 344,164 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/80dae855-0135-… | associations resolved on the elementary layer |
| 392,728 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H6O4"],"… | typed the way the ontology types it |
| 401,337 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/17938 | prefLabel | ef:agent/bootstrap_labels | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v0 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v1 |
| ef:activity/change/20260821T1554374006150000/17939 | name | ef:agent/bootstrap_labels | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v1 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v2 |
| ef:activity/change/20260821T1554374006150000/17940 | synonyms | ef:agent/bootstrap_labels | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v2 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v3 |
| ef:activity/change/20260821T1554374006150000/126324 | context | ef:agent/default_context_mapping | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v3 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v4 |
| ef:activity/change/20260821T1554374006150000/126325 | context_iri | ef:agent/default_context_mapping | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v4 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v5 |
| ef:activity/change/20260821T1554374006150000/219213 | unit_iri | ef:agent/unit_normalization | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v5 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v6 |
| ef:activity/change/20260821T1554374006150000/243983 | properties | ef:agent/enrich_references | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v6 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v7 |
| ef:activity/change/20260821T1554374006150000/243984 | skos_definition | ef:agent/enrich_references | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v7 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v8 |
| ef:activity/change/20260821T1554374006150000/243985 | references | ef:agent/enrich_references | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v8 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v9 |
| ef:activity/change/20260821T1554374006150000/253158 | properties | ef:agent/rdkit_pre_consensus | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v9 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v10 |
| ef:activity/change/20260821T1554374006150000/256744 | altLabel | ef:agent/chebi_altlabels | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v10 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v11 |
| ef:activity/change/20260821T1554374006150000/262421 | prefLabel | ef:agent/consensus_match | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v11 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v12 |
| ef:activity/change/20260821T1554374006150000/262422 | altLabel | ef:agent/consensus_match | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v12 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v13 |
| ef:activity/change/20260821T1554374006150000/262423 | altLabel | ef:agent/consensus_match | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v13 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v14 |
| ef:activity/change/20260821T1554374006150000/262424 | cas_match_labels | ef:agent/consensus_match | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v14 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v15 |
| ef:activity/change/20260821T1554374006150000/278364 | properties | ef:agent/opsin_iupac | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v15 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v16 |
| ef:activity/change/20260821T1554374006150000/285121 | properties | ef:agent/rdkit_post_consensus | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v16 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v17 |
| ef:activity/change/20260821T1554374006150000/290872 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v17 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v18 |
| ef:activity/change/20260821T1554374006150000/344164 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v18 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v19 |
| ef:activity/change/20260821T1554374006150000/392728 | properties | ef:agent/normalise_property_values | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v19 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v20 |
| ef:activity/change/20260821T1554374006150000/401337 | types | ef:agent/link_flows_to_their_substance | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v20 | ef:flow/80dae855-0135-4772-b0e6-0b5bca9a46a4/v21 |