Pyridin-3-ol
Everything that changed this flow. Back to the flow
81ef7fb3-d09a-463c-8fd8-77f79878e8b8
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 18470' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pyridin-3-ol||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-00-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc31ab3eff1d0fc0: {'109-00-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['109-00-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_87440']; candidate_pubchem_cids=[7971, 8617, 23293, 53434842, 77134453]; selected_pubchem_cids=[7971]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 12,635 | bootstrap_labels | prefLabel | — | [{"@value":"pyridin-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Bootstrapped prefLabel from legacy name field |
| 12,636 | bootstrap_labels | name | pyridin-3-ol | — | Purged legacy name field to enforce prefLabel usage |
| 12,637 | bootstrap_labels | synonyms | [".beta.-Hydroxypyridine","3-HYDROXYPYRIDINE","3-Oxopyridine","3-Pyridinol","3-Pyridol","3-Pyridone","3-Pyridyl alcohol… | [] | Removed legacy synonyms field in favor of structured labels |
| 127,022 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 127,023 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 217,520 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,026 | normalize_name_case | prefLabel | [{"@value":"pyridin-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | [{"@value":"Pyridin-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 239,185 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 239,186 | enrich_references | skos_definition | — | [{"@value":"A monohydroxypyridine that is pyridine in which the hydrogen at position 3 has been replaced by a hydroxy g… | Merged ChEBI/PubChem definitions into skos:definition |
| 239,187 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.202.743E","provenance":{"prov:wasGeneratedBy":"enrich_refer… | Added references with provenance; cas_numbers=['109-00-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_87440']; candidate_pubchem_cids=[7971, 8617, 23293, 53434842, 77134453]; selected_pubchem_cids=[7971]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,769 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | rdkit_pre_consensus from 'C1=CC(=CN=C1)O'; added: monoisotopic_mass |
| 256,117 | chebi_altlabels | altLabel | [] | [{"@value":"3-hydroxypyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,200 | consensus_match | altLabel | [{"@value":"3-hydroxypyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"3-hydroxypyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | group_key=pyridin-3-ol||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=109-00-2; added Common Chemistry CAS names as altLabel: 3(?<em>H</em>)-Pyridinone, 3-Pyridinol, 3-Pyridyl alcohol, NSC 18470, β-Hydroxypyridine, β-Pyridinone; object_uuid=fo-bc31ab3eff1d0fc0 |
| 271,201 | consensus_match | cas_match_labels | — | {"109-00-2":"exactMatch"} | group_key=pyridin-3-ol||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'109-00-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc31ab3eff1d0fc0: {'109-00-2': 'exactMatch'} |
| 276,956 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pyridin-3-ol' |
| 283,607 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | rdkit_post_consensus from 'Oc1cccnc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,863 | strip_catalogue_altlabels | altLabel | [{"@value":"3-hydroxypyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"3-hydroxypyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Removed 1 catalogue altLabel value(s): 'NSC 18470' (registry code) |
| 344,513 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/81ef7fb3-d09a-… | associations resolved on the elementary layer |
| 391,312 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H5NO"],"… | typed the way the ontology types it |
| 399,285 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/12635 | prefLabel | ef:agent/bootstrap_labels | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v0 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v1 |
| ef:activity/change/20260821T1554374006150000/12636 | name | ef:agent/bootstrap_labels | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v1 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v2 |
| ef:activity/change/20260821T1554374006150000/12637 | synonyms | ef:agent/bootstrap_labels | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v2 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v3 |
| ef:activity/change/20260821T1554374006150000/127022 | context | ef:agent/default_context_mapping | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v3 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v4 |
| ef:activity/change/20260821T1554374006150000/127023 | context_iri | ef:agent/default_context_mapping | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v4 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v5 |
| ef:activity/change/20260821T1554374006150000/217520 | unit_iri | ef:agent/unit_normalization | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v5 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v6 |
| ef:activity/change/20260821T1554374006150000/224026 | prefLabel | ef:agent/normalize_name_case | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v6 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v7 |
| ef:activity/change/20260821T1554374006150000/239185 | properties | ef:agent/enrich_references | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v7 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v8 |
| ef:activity/change/20260821T1554374006150000/239186 | skos_definition | ef:agent/enrich_references | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v8 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v9 |
| ef:activity/change/20260821T1554374006150000/239187 | references | ef:agent/enrich_references | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v9 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v10 |
| ef:activity/change/20260821T1554374006150000/251769 | properties | ef:agent/rdkit_pre_consensus | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v10 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v11 |
| ef:activity/change/20260821T1554374006150000/256117 | altLabel | ef:agent/chebi_altlabels | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v11 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v12 |
| ef:activity/change/20260821T1554374006150000/271200 | altLabel | ef:agent/consensus_match | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v12 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v13 |
| ef:activity/change/20260821T1554374006150000/271201 | cas_match_labels | ef:agent/consensus_match | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v13 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v14 |
| ef:activity/change/20260821T1554374006150000/276956 | properties | ef:agent/opsin_iupac | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v14 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v15 |
| ef:activity/change/20260821T1554374006150000/283607 | properties | ef:agent/rdkit_post_consensus | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v15 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v16 |
| ef:activity/change/20260821T1554374006150000/289863 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v16 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v17 |
| ef:activity/change/20260821T1554374006150000/344513 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v17 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v18 |
| ef:activity/change/20260821T1554374006150000/391312 | properties | ef:agent/normalise_property_values | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v18 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v19 |
| ef:activity/change/20260821T1554374006150000/399285 | types | ef:agent/link_flows_to_their_substance | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v19 | ef:flow/81ef7fb3-d09a-463c-8fd8-77f79878e8b8/v20 |