Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 59697' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=100-70-9; cc_chebi_agreed_name='2-Cyanopyridine'; object_uuid=fo-68eb7d9faeb9a13e
cas_match_labels 1 consensus_match group_key=pyridine-2-carbonitrile||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-70-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-68eb7d9faeb9a13e: {'100-70-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['100-70-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27837']; candidate_pubchem_cids=[7522, 69705]; selected_pubchem_cids=[7522]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
3,998 bootstrap_labels prefLabel [{"@value":"pyridine-2-carbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Bootstrapped prefLabel from legacy name field
3,999 bootstrap_labels name pyridine-2-carbonitrile Purged legacy name field to enforce prefLabel usage
4,000 bootstrap_labels synonyms ["2-Cyanopyridine","2-PYRIDINECARBONITRILE","2-Pyridinecarboxylic acid, nitrile","2-Pyridyl nitrile","AC-2441","AC1L1OY… [] Removed legacy synonyms field in favor of structured labels
127,144 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
127,145 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
214,676 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,009 normalize_name_case prefLabel [{"@value":"pyridine-2-carbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… [{"@value":"Pyridine-2-carbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
231,032 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,033 enrich_references skos_definition [{"@value":"A cyanopyridine carrying the cyano group at position 2.","@language":"en","provenance":{"prov:wasGeneratedB… Merged ChEBI/PubChem definitions into skos:definition
231,034 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J58.011B","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['100-70-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27837']; candidate_pubchem_cids=[7522, 69705]; selected_pubchem_cids=[7522]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,427 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… rdkit_pre_consensus from 'C1=CC=NC(=C1)C#N'; added: monoisotopic_mass
254,891 chebi_altlabels altLabel [] [{"@value":"2-Cyanopyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,211 consensus_match prefLabel [{"@value":"Pyridine-2-carbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… [{"@value":"2-Cyanopyridine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… cas=100-70-9; cc_chebi_agreed_name='2-Cyanopyridine'; object_uuid=fo-68eb7d9faeb9a13e
271,212 consensus_match altLabel [{"@value":"2-Cyanopyridine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"2-Pyridinecarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… cas=100-70-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-68eb7d9faeb9a13e
271,213 consensus_match altLabel [{"@value":"2-Pyridinecarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"2-Pyridinecarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… group_key=pyridine-2-carbonitrile||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=100-70-9; added Common Chemistry CAS names as altLabel: 2-Azabenzonitrile, 2-Nitrilopyridine, 2-Pyridinenitrile, 2-Pyridyl cyanide, 2-Pyridylnitrile, NSC 59697, α-Cyanopyridine; object_uuid=fo-68eb7d9faeb9a13e
271,214 consensus_match cas_match_labels {"100-70-9":"exactMatch"} group_key=pyridine-2-carbonitrile||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'100-70-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-68eb7d9faeb9a13e: {'100-70-9': 'exactMatch'}
274,555 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-Cyanopyridine'
281,004 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… rdkit_post_consensus from 'N#Cc1ccccn1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,071 strip_catalogue_altlabels altLabel [{"@value":"2-Pyridinecarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… [{"@value":"2-Pyridinecarbonitrile","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… Removed 1 catalogue altLabel value(s): 'NSC 59697' (registry code)
344,572 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/82227bef-0799-… associations resolved on the elementary layer
388,860 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4N2"],"… typed the way the ontology types it
395,774 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1122181958110000/3998 prefLabel ef:agent/bootstrap_labels ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v0 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v1
ef:activity/change/20260821T1122181958110000/3999 name ef:agent/bootstrap_labels ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v1 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v2
ef:activity/change/20260821T1122181958110000/4000 synonyms ef:agent/bootstrap_labels ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v2 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v3
ef:activity/change/20260821T1122181958110000/127144 context ef:agent/default_context_mapping ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v3 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v4
ef:activity/change/20260821T1122181958110000/127145 context_iri ef:agent/default_context_mapping ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v4 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v5
ef:activity/change/20260821T1122181958110000/214676 unit_iri ef:agent/unit_normalization ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v5 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v6
ef:activity/change/20260821T1122181958110000/222009 prefLabel ef:agent/normalize_name_case ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v6 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v7
ef:activity/change/20260821T1122181958110000/231032 properties ef:agent/enrich_references ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v7 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v8
ef:activity/change/20260821T1122181958110000/231033 skos_definition ef:agent/enrich_references ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v8 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v9
ef:activity/change/20260821T1122181958110000/231034 references ef:agent/enrich_references ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v9 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v10
ef:activity/change/20260821T1122181958110000/249427 properties ef:agent/rdkit_pre_consensus ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v10 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v11
ef:activity/change/20260821T1122181958110000/254891 altLabel ef:agent/chebi_altlabels ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v11 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v12
ef:activity/change/20260821T1122181958110000/271211 prefLabel ef:agent/consensus_match ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v12 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v13
ef:activity/change/20260821T1122181958110000/271212 altLabel ef:agent/consensus_match ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v13 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v14
ef:activity/change/20260821T1122181958110000/271213 altLabel ef:agent/consensus_match ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v14 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v15
ef:activity/change/20260821T1122181958110000/271214 cas_match_labels ef:agent/consensus_match ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v15 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v16
ef:activity/change/20260821T1122181958110000/274555 properties ef:agent/opsin_iupac ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v16 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v17
ef:activity/change/20260821T1122181958110000/281004 properties ef:agent/rdkit_post_consensus ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v17 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v18
ef:activity/change/20260821T1122181958110000/288071 altLabel ef:agent/strip_catalogue_altlabels ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v18 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v19
ef:activity/change/20260821T1122181958110000/344572 concept_associations ef:agent/carry_associations_onto_flows ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v19 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v20
ef:activity/change/20260821T1122181958110000/388860 properties ef:agent/normalise_property_values ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v20 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v21
ef:activity/change/20260821T1122181958110000/395774 types ef:agent/link_flows_to_their_substance ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v21 ef:flow/82227bef-0799-46f3-843a-67fa791a0bf8/v22

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