Indol-5-ylamine
Everything that changed this flow. Back to the flow
828207ff-3866-4caa-aa78-5a686f5d713d
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 61452' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=indol-5-ylamine||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5192-03-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-72ce6db68ff84c0f: {'5192-03-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['5192-03-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33067']; candidate_pubchem_cids=[78867, 49758848]; selected_pubchem_cids=[78867]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,954 | bootstrap_labels | prefLabel | — | [{"@value":"indol-5-ylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Bootstrapped prefLabel from legacy name field |
| 22,955 | bootstrap_labels | name | indol-5-ylamine | — | Purged legacy name field to enforce prefLabel usage |
| 22,956 | bootstrap_labels | synonyms | ["1H-Indol-5-amine","5-Aminoindole","5-Indolamine","A-5640","A2071","AB1005630","AC-5465","AC1L2W4P","AC1Q52F0","AKOS00… | [] | Removed legacy synonyms field in favor of structured labels |
| 127,360 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 127,361 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 220,593 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,242 | normalize_name_case | prefLabel | [{"@value":"indol-5-ylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | [{"@value":"Indol-5-ylamine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,767 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,768 | enrich_references | skos_definition | — | [{"@value":"An indolamine carrying an amino group at position 5.","@language":"en","provenance":{"prov:wasGeneratedBy":… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,769 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J80.971C","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['5192-03-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33067']; candidate_pubchem_cids=[78867, 49758848]; selected_pubchem_cids=[78867]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,256 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | rdkit_pre_consensus from 'C1=CC2=C(C=CN2)C=C1N'; added: monoisotopic_mass |
| 257,284 | chebi_altlabels | altLabel | [] | [{"@value":"1H-indol-5-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,958 | consensus_match | altLabel | [{"@value":"1H-indol-5-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | [{"@value":"1H-indol-5-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | group_key=indol-5-ylamine||dimension=Environmental > media=Water > water_body=Ocean; cas=5192-03-0; added Common Chemistry CAS names as altLabel: (Indol-5-yl)amine, 1<em>H</em>-Indol-5-ylamine, 5-Amino-1<em>H</em>-indole, 5-Indolamine, Indole, 5-amino-, NSC 61452; object_uuid=fo-72ce6db68ff84c0f |
| 267,959 | consensus_match | cas_match_labels | — | {"5192-03-0":"exactMatch"} | group_key=indol-5-ylamine||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'5192-03-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-72ce6db68ff84c0f: {'5192-03-0': 'exactMatch'} |
| 279,488 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Indol-5-ylamine' |
| 286,365 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | rdkit_post_consensus from 'Nc1ccc2[nH]ccc2c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,704 | strip_catalogue_altlabels | altLabel | [{"@value":"1H-indol-5-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | [{"@value":"1H-indol-5-amine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… | Removed 1 catalogue altLabel value(s): 'NSC 61452' (registry code) |
| 344,682 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/828207ff-3866-… | associations resolved on the elementary layer |
| 393,882 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8N2"],"… | typed the way the ontology types it |
| 403,097 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/22954 | prefLabel | ef:agent/bootstrap_labels | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v0 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v1 |
| ef:activity/change/20260822T0600486828500000/22955 | name | ef:agent/bootstrap_labels | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v1 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v2 |
| ef:activity/change/20260822T0600486828500000/22956 | synonyms | ef:agent/bootstrap_labels | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v2 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v3 |
| ef:activity/change/20260822T0600486828500000/127360 | context | ef:agent/default_context_mapping | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v3 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v4 |
| ef:activity/change/20260822T0600486828500000/127361 | context_iri | ef:agent/default_context_mapping | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v4 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v5 |
| ef:activity/change/20260822T0600486828500000/220593 | unit_iri | ef:agent/unit_normalization | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v5 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v6 |
| ef:activity/change/20260822T0600486828500000/226242 | prefLabel | ef:agent/normalize_name_case | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v6 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v7 |
| ef:activity/change/20260822T0600486828500000/247767 | properties | ef:agent/enrich_references | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v7 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v8 |
| ef:activity/change/20260822T0600486828500000/247768 | skos_definition | ef:agent/enrich_references | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v8 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v9 |
| ef:activity/change/20260822T0600486828500000/247769 | references | ef:agent/enrich_references | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v9 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v10 |
| ef:activity/change/20260822T0600486828500000/254256 | properties | ef:agent/rdkit_pre_consensus | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v10 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v11 |
| ef:activity/change/20260822T0600486828500000/257284 | altLabel | ef:agent/chebi_altlabels | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v11 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v12 |
| ef:activity/change/20260822T0600486828500000/267958 | altLabel | ef:agent/consensus_match | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v12 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v13 |
| ef:activity/change/20260822T0600486828500000/267959 | cas_match_labels | ef:agent/consensus_match | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v13 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v14 |
| ef:activity/change/20260822T0600486828500000/279488 | properties | ef:agent/opsin_iupac | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v14 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v15 |
| ef:activity/change/20260822T0600486828500000/286365 | properties | ef:agent/rdkit_post_consensus | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v15 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v16 |
| ef:activity/change/20260822T0600486828500000/291704 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v16 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v17 |
| ef:activity/change/20260822T0600486828500000/344682 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v17 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v18 |
| ef:activity/change/20260822T0600486828500000/393882 | properties | ef:agent/normalise_property_values | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v18 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v19 |
| ef:activity/change/20260822T0600486828500000/403097 | types | ef:agent/link_flows_to_their_substance | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v19 | ef:flow/828207ff-3866-4caa-aa78-5a686f5d713d/v20 |