β-Alanine
Everything that changed this flow. Back to the flow
83297f06-275b-4d57-8e31-16cc70352fcc
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 7603' (registry code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=107-95-9; cc_chebi_agreed_name='β-Alanine'; object_uuid=fo-8ac62fc98cb3492f |
| cas_match_labels | 1 | consensus_match | group_key=β-aminopropionicacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory']; cas_sources={'107-95-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8ac62fc98cb3492f: {'107-95-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['107-95-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16958']; candidate_pubchem_cids=[239, 24066, 66266, 4755801]; selected_pubchem_cids=[239]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 185 | bootstrap_labels | prefLabel | — | [{"@value":"β-aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Bootstrapped prefLabel from legacy name field |
| 186 | bootstrap_labels | name | β-aminopropionic acid | — | Purged legacy name field to enforce prefLabel usage |
| 187 | bootstrap_labels | synonyms | ["organic","î²-alanine"] | [] | Removed legacy synonyms field in favor of structured labels |
| 127,750 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 127,751 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 213,400 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,136 | normalize_name_case | prefLabel | [{"@value":"β-aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | [{"@value":"Β-aminopropionic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 227,344 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 227,345 | enrich_references | skos_definition | — | [{"@value":"A naturally-occurring β-amino acid comprising propionic acid with the amino group in the 3-position.","@lan… | Merged ChEBI/PubChem definitions into skos:definition |
| 227,346 | enrich_references | references | [] | [{"@id":"gmelin:49614","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… | Added references with provenance; cas_numbers=['107-95-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16958']; candidate_pubchem_cids=[239, 24066, 66266, 4755801]; selected_pubchem_cids=[239]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,362 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | rdkit_pre_consensus from 'C(CN)C(=O)O'; added: monoisotopic_mass |
| 254,409 | chebi_altlabels | altLabel | [] | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 273,444 | consensus_match | prefLabel | [{"@value":"Β-aminopropionic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | [{"@value":"β-Alanine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… | cas=107-95-9; cc_chebi_agreed_name='β-Alanine'; object_uuid=fo-8ac62fc98cb3492f |
| 273,445 | consensus_match | altLabel | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | cas=107-95-9; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-8ac62fc98cb3492f |
| 273,446 | consensus_match | altLabel | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | group_key=β-aminopropionicacid||dimension=Environmental > media=Water > water_body=Surface water; cas=107-95-9; added Common Chemistry CAS names as altLabel: 2-Carboxyethylamine, 3-Azaniumylpropanoate, 4: PN: WO2025111600 TABLE: 2 sequence, Abufene, MeSH ID: D015091, NSC 7603, Propanoic acid, 3-amino-, β-Aminopropanoic acid, ω-Aminopropionic acid; object_uuid=fo-8ac62fc98cb3492f |
| 273,447 | consensus_match | cas_match_labels | — | {"107-95-9":"exactMatch"} | group_key=β-aminopropionicacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory']; cas_sources={'107-95-9': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8ac62fc98cb3492f: {'107-95-9': 'exactMatch'} |
| 273,505 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'β-Alanine' |
| 279,857 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | rdkit_post_consensus from 'NCCC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,304 | strip_catalogue_altlabels | altLabel | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | [{"@value":"3-Aminopropionic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… | Removed 1 catalogue altLabel value(s): 'NSC 7603' (registry code) |
| 344,897 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/83297f06-275b-… | associations resolved on the elementary layer |
| 387,783 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2"],… | typed the way the ontology types it |
| 394,256 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/185 | prefLabel | ef:agent/bootstrap_labels | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v0 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v1 |
| ef:activity/change/20260820T0738569779880000/186 | name | ef:agent/bootstrap_labels | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v1 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v2 |
| ef:activity/change/20260820T0738569779880000/187 | synonyms | ef:agent/bootstrap_labels | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v2 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v3 |
| ef:activity/change/20260820T0738569779880000/127750 | context | ef:agent/default_context_mapping | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v3 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v4 |
| ef:activity/change/20260820T0738569779880000/127751 | context_iri | ef:agent/default_context_mapping | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v4 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v5 |
| ef:activity/change/20260820T0738569779880000/213400 | unit_iri | ef:agent/unit_normalization | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v5 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v6 |
| ef:activity/change/20260820T0738569779880000/221136 | prefLabel | ef:agent/normalize_name_case | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v6 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v7 |
| ef:activity/change/20260820T0738569779880000/227344 | properties | ef:agent/enrich_references | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v7 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v8 |
| ef:activity/change/20260820T0738569779880000/227345 | skos_definition | ef:agent/enrich_references | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v8 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v9 |
| ef:activity/change/20260820T0738569779880000/227346 | references | ef:agent/enrich_references | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v9 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v10 |
| ef:activity/change/20260820T0738569779880000/248362 | properties | ef:agent/rdkit_pre_consensus | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v10 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v11 |
| ef:activity/change/20260820T0738569779880000/254409 | altLabel | ef:agent/chebi_altlabels | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v11 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v12 |
| ef:activity/change/20260820T0738569779880000/273444 | prefLabel | ef:agent/consensus_match | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v12 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v13 |
| ef:activity/change/20260820T0738569779880000/273445 | altLabel | ef:agent/consensus_match | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v13 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v14 |
| ef:activity/change/20260820T0738569779880000/273446 | altLabel | ef:agent/consensus_match | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v14 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v15 |
| ef:activity/change/20260820T0738569779880000/273447 | cas_match_labels | ef:agent/consensus_match | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v15 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v16 |
| ef:activity/change/20260820T0738569779880000/273505 | properties | ef:agent/opsin_iupac | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v16 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v17 |
| ef:activity/change/20260820T0738569779880000/279857 | properties | ef:agent/rdkit_post_consensus | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v17 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v18 |
| ef:activity/change/20260820T0738569779880000/287304 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v18 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v19 |
| ef:activity/change/20260820T0738569779880000/344897 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v19 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v20 |
| ef:activity/change/20260820T0738569779880000/387783 | properties | ef:agent/normalise_property_values | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v20 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v21 |
| ef:activity/change/20260820T0738569779880000/394256 | types | ef:agent/link_flows_to_their_substance | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v21 | ef:flow/83297f06-275b-4d57-8e31-16cc70352fcc/v22 |