Consensus flow list

By field

15 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 7 catalogue altLabel value(s): 'A 97565N' (grade code), 'A 9765N' (grade code), 'FS 350' (grade code), 'FS 600' (grade code), 'FS 600 (insecticide)' (grade code), 'WS 70' (grade code), 'WS 70 (insecticide)' (grade code)
cas_match_labels 1 consensus_match group_key=thiamethoxam||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'pubchem']; cas_sources={'153719-23-4': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9aaa1ea510695276: {'153719-23-4': 'exactMatch'}
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air high stack
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air high stack
dcterms_is_replaced_by 1 pipeline.deduplication duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
is_replaced_by_uuid 1 pipeline.deduplication duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
owl_deprecated 1 pipeline.deduplication duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['153719-23-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39185']; candidate_pubchem_cids=[107646, 5485188, 5821911, 10997083, 77519009, 129893450]; selected_pubchem_cids=[107646]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
5,582 bootstrap_labels prefLabel [{"@value":"Thiamethoxam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
5,583 bootstrap_labels name Thiamethoxam Purged legacy name field to enforce prefLabel usage
129,800 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air high stack
129,801 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air high stack
215,209 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
232,557 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1, commonchemistry_cas=['153719-23-4'])
232,558 enrich_references skos_definition [{"@value":"An oxadiazane that is tetrahydro-N-nitro-4H-1,3,5-oxadiazin-4-imine bearing (2-chloro-1,3-thiazol-5-yl)meth… Merged ChEBI/PubChem definitions into skos:definition
232,559 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=153719-23-4","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['153719-23-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_39185']; candidate_pubchem_cids=[107646, 5485188, 5821911, 10997083, 77519009, 129893450]; selected_pubchem_cids=[107646]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,869 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… rdkit_pre_consensus from 'CN1COCN(C1=N[N+](=O)[O-])CC2=CN=C(S2)Cl'; added: monoisotopic_mass
255,087 chebi_altlabels altLabel [] [{"@value":"(4E)-3-[(2-chloro-1,3-thiazol-5-yl)methyl]-5-methyl-N-nitro-1,3,5-oxadiazinan-4-imine","@language":"en","so… Added 4 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s)
272,571 consensus_match altLabel [{"@value":"(4E)-3-[(2-chloro-1,3-thiazol-5-yl)methyl]-5-methyl-N-nitro-1,3,5-oxadiazinan-4-imine","@language":"en","so… [{"@value":"(4E)-3-[(2-chloro-1,3-thiazol-5-yl)methyl]-5-methyl-N-nitro-1,3,5-oxadiazinan-4-imine","@language":"en","so… group_key=thiamethoxam||dimension=Environmental > media=Water > water_body=Ocean; cas=153719-23-4; added Common Chemistry CAS names as altLabel: 3-[(2-Chloro-5-thiazolyl)methyl]-5-methyl-4-nitroiminotetrahydro-1,3,5-oxadiazine, 3-[(2-Chloro-5-thiazolyl)methyl]tetrahydro-5-methyl-<em>N</em>-nitro-4<em>H</em>-1,3,5-oxadiazin-4-imine, 4<em>H</em>-1,3,5-Oxadiazin-4-imine, 3-[(2-chloro-5-thiazolyl)methyl]tetrahydro-5-methyl-<em>N</em>-nitro-, A 97565N, A 9765N, Actara, Actara 25WG, Actara 2GR, Actara 500WG, Adage, Adage 5FS, CGA 293343, Centric, Codigo, Cruiser, Cruiser 350FS, Cruiser 5FS, Cruiser 60 FS, Cruiser 600FS, Cruiser A 9765, Diacloden, FS 350, FS 600, FS 600 (insecticide), Flagship, Meridian, Optigard, Pelexam, Platinum (insecticide), Platinum 240SC, Tricon, WS 70, WS 70 (insecticide), Xamox; object_uuid=fo-9aaa1ea510695276
272,572 consensus_match cas_match_labels {"153719-23-4":"exactMatch"} group_key=thiamethoxam||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'pubchem']; cas_sources={'153719-23-4': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-9aaa1ea510695276: {'153719-23-4': 'exactMatch'}
275,024 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-((2-chloro-5-thiazolyl)methyl)tetrahydro-5-methyl-N-nitro-4H-1,3,5-oxadiazin-4-imine'
281,505 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… rdkit_post_consensus from 'CN1COCN(Cc2cnc(Cl)s2)C1=N[N+](=O)[O-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,412 strip_catalogue_altlabels altLabel [{"@value":"(4E)-3-[(2-chloro-1,3-thiazol-5-yl)methyl]-5-methyl-N-nitro-1,3,5-oxadiazinan-4-imine","@language":"en","so… [{"@value":"(4E)-3-[(2-chloro-1,3-thiazol-5-yl)methyl]-5-methyl-N-nitro-1,3,5-oxadiazinan-4-imine","@language":"en","so… Removed 7 catalogue altLabel value(s): 'A 97565N' (grade code), 'A 9765N' (grade code), 'FS 350' (grade code), 'FS 600' (grade code), 'FS 600 (insecticide)' (grade code), 'WS 70' (grade code), 'WS 70 (insecticide)' (grade code)
293,679 pipeline.deduplication owl_deprecated yes duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
293,680 pipeline.deduplication dcterms_is_replaced_by urn:uuid:403905ad-b028-41cf-8b84-9484f8c743ab duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
293,681 pipeline.deduplication is_replaced_by_uuid 403905ad-b028-41cf-8b84-9484f8c743ab duplicate of 403905ad-b028-41cf-8b84-9484f8c743ab
389,331 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H10ClN5O… typed the way the ontology types it
396,419 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,420 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22583","rdfs:label":"antifeedant","http://www.w3.org/2004/02/skos/core#de… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/5582 prefLabel ef:agent/bootstrap_labels ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v0 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v1
ef:activity/change/20260820T1555490862250000/5583 name ef:agent/bootstrap_labels ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v1 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v2
ef:activity/change/20260820T1555490862250000/129800 context ef:agent/default_context_mapping ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v2 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v3
ef:activity/change/20260820T1555490862250000/129801 context_iri ef:agent/default_context_mapping ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v3 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v4
ef:activity/change/20260820T1555490862250000/215209 unit_iri ef:agent/unit_normalization ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v4 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v5
ef:activity/change/20260820T1555490862250000/232557 properties ef:agent/enrich_references ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v5 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v6
ef:activity/change/20260820T1555490862250000/232558 skos_definition ef:agent/enrich_references ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v6 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v7
ef:activity/change/20260820T1555490862250000/232559 references ef:agent/enrich_references ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v7 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v8
ef:activity/change/20260820T1555490862250000/249869 properties ef:agent/rdkit_pre_consensus ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v8 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v9
ef:activity/change/20260820T1555490862250000/255087 altLabel ef:agent/chebi_altlabels ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v9 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v10
ef:activity/change/20260820T1555490862250000/272571 altLabel ef:agent/consensus_match ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v10 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v11
ef:activity/change/20260820T1555490862250000/272572 cas_match_labels ef:agent/consensus_match ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v11 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v12
ef:activity/change/20260820T1555490862250000/275024 properties ef:agent/opsin_iupac ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v12 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v13
ef:activity/change/20260820T1555490862250000/281505 properties ef:agent/rdkit_post_consensus ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v13 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v14
ef:activity/change/20260820T1555490862250000/288412 altLabel ef:agent/strip_catalogue_altlabels ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v14 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v15
ef:activity/change/20260820T1555490862250000/293679 owl_deprecated ef:agent/pipeline.deduplication ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v15 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v16
ef:activity/change/20260820T1555490862250000/293680 dcterms_is_replaced_by ef:agent/pipeline.deduplication ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v16 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v17
ef:activity/change/20260820T1555490862250000/293681 is_replaced_by_uuid ef:agent/pipeline.deduplication ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v17 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v18
ef:activity/change/20260820T1555490862250000/389331 properties ef:agent/normalise_property_values ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v18 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v19
ef:activity/change/20260820T1555490862250000/396419 types ef:agent/link_flows_to_their_substance ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v19 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v20
ef:activity/change/20260820T1555490862250000/396420 roles ef:agent/link_flows_to_their_substance ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v20 ef:flow/86893280-de8c-4508-9370-19663b6d1df9/v21

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