Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=51-05-8; cc_chebi_agreed_name='Procaine hydrochloride'; object_uuid=fo-f333be28a6e7922a
cas_match_labels 1 consensus_match group_key=2-(diethylamino)ethyl4-aminobenzoatehydrochloride||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'51-05-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f333be28a6e7922a: {'51-05-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['51-05-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8431']; candidate_pubchem_cids=[4914, 5795, 15939510, 45489743]; selected_pubchem_cids=[5795]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
11,933 bootstrap_labels prefLabel [{"@value":"2-(diethylamino)ethyl 4-aminobenzoate hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"boot… Bootstrapped prefLabel from legacy name field
11,934 bootstrap_labels name 2-(diethylamino)ethyl 4-aminobenzoate hydrochloride Purged legacy name field to enforce prefLabel usage
11,935 bootstrap_labels synonyms ["organic"] [] Removed legacy synonyms field in favor of structured labels
130,142 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
130,143 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
217,294 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,861 normalize_name_case prefLabel [{"@value":"2-(diethylamino)ethyl 4-aminobenzoate hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"boot… [{"@value":"2-(diethylamino)ethyl 4-aminobenzoate Hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"boot… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
238,530 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
238,531 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
238,532 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.000.071","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['51-05-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8431']; candidate_pubchem_cids=[4914, 5795, 15939510, 45489743]; selected_pubchem_cids=[5795]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,578 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… rdkit_pre_consensus from 'CCN(CC)CCOC(=O)C1=CC=C(C=C1)N.Cl'; added: monoisotopic_mass
256,028 chebi_altlabels altLabel [] [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,336 consensus_match prefLabel [{"@value":"2-(diethylamino)ethyl 4-aminobenzoate Hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"boot… [{"@value":"Procaine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribu… cas=51-05-8; cc_chebi_agreed_name='Procaine hydrochloride'; object_uuid=fo-f333be28a6e7922a
260,337 consensus_match altLabel [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… cas=51-05-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-f333be28a6e7922a
260,338 consensus_match altLabel [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… group_key=2-(diethylamino)ethyl4-aminobenzoatehydrochloride||dimension=Environmental > media=Water > water_body=Ocean; cas=51-05-8; added Common Chemistry CAS names as altLabel: 2-Diethylaminoethyl <em>p</em>-aminobenzoate hydrochloride, Allocaine, Aminocaine, Anadolor, Anesthesol, Anestil, Atoxicocaine, Benzoic acid, 4-amino-, 2-(diethylamino)ethyl ester, hydrochloride (1:1), Benzoic acid, 4-amino-, 2-(diethylamino)ethyl ester, monohydrochloride, Benzoic acid, <em>p</em>-amino-, 2-(diethylamino)ethyl ester, monohydrochloride, Bernacaine, Cetain, Chlorocaine, Diethylaminoethanol 4-aminobenzoate hydrochloride, Enpro, Ethocain, Ethocaine, Eugerase, Geriocaine, Gero, Gerovital, Gerovital H<sub>3</sub>, Herocaine, Irocaine, Isocain, Isocaine, Isocaine-Heisler, Jenacaine, Juvocaine, Kerocaine, Lactocaine, Medaject, Naucain, Naucaine, Neocaine, Neotonocaine, Novocain, Novocaine, Novocaine hydrochloride, Omnicain, Paracain, Planocaine, Polocaine, Procaine monohydrochloride, Rocain, Scurocaine, Sevicaine, Syncaine, Syntocain, Topokain, Westocaine; object_uuid=fo-f333be28a6e7922a
260,339 consensus_match cas_match_labels {"51-05-8":"exactMatch"} group_key=2-(diethylamino)ethyl4-aminobenzoatehydrochloride||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'51-05-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f333be28a6e7922a: {'51-05-8': 'exactMatch'}
276,759 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-(diethylamino)ethyl 4-aminobenzoate Hydrochloride'
283,395 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… rdkit_post_consensus from 'CCN(CC)CCOC(=O)c1ccc(N)cc1.Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,606 dedupe_altlabels altLabel [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"Novocain (TN)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Deduplicated altLabel values and removed entries matching prefLabel
346,071 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/872b6653-b8f7-… associations resolved on the elementary layer
391,116 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H20N2O2… typed the way the ontology types it
399,012 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularComplex"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/11933 prefLabel ef:agent/bootstrap_labels ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v0 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v1
ef:activity/change/20260821T1554374006150000/11934 name ef:agent/bootstrap_labels ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v1 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v2
ef:activity/change/20260821T1554374006150000/11935 synonyms ef:agent/bootstrap_labels ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v2 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v3
ef:activity/change/20260821T1554374006150000/130142 context ef:agent/default_context_mapping ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v3 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v4
ef:activity/change/20260821T1554374006150000/130143 context_iri ef:agent/default_context_mapping ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v4 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v5
ef:activity/change/20260821T1554374006150000/217294 unit_iri ef:agent/unit_normalization ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v5 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v6
ef:activity/change/20260821T1554374006150000/223861 prefLabel ef:agent/normalize_name_case ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v6 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v7
ef:activity/change/20260821T1554374006150000/238530 properties ef:agent/enrich_references ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v7 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v8
ef:activity/change/20260821T1554374006150000/238531 skos_definition ef:agent/enrich_references ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v8 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v9
ef:activity/change/20260821T1554374006150000/238532 references ef:agent/enrich_references ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v9 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v10
ef:activity/change/20260821T1554374006150000/251578 properties ef:agent/rdkit_pre_consensus ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v10 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v11
ef:activity/change/20260821T1554374006150000/256028 altLabel ef:agent/chebi_altlabels ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v11 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v12
ef:activity/change/20260821T1554374006150000/260336 prefLabel ef:agent/consensus_match ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v12 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v13
ef:activity/change/20260821T1554374006150000/260337 altLabel ef:agent/consensus_match ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v13 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v14
ef:activity/change/20260821T1554374006150000/260338 altLabel ef:agent/consensus_match ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v14 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v15
ef:activity/change/20260821T1554374006150000/260339 cas_match_labels ef:agent/consensus_match ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v15 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v16
ef:activity/change/20260821T1554374006150000/276759 properties ef:agent/opsin_iupac ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v16 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v17
ef:activity/change/20260821T1554374006150000/283395 properties ef:agent/rdkit_post_consensus ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v17 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v18
ef:activity/change/20260821T1554374006150000/292606 altLabel ef:agent/dedupe_altlabels ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v18 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v19
ef:activity/change/20260821T1554374006150000/346071 concept_associations ef:agent/carry_associations_onto_flows ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v19 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v20
ef:activity/change/20260821T1554374006150000/391116 properties ef:agent/normalise_property_values ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v20 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v21
ef:activity/change/20260821T1554374006150000/399012 types ef:agent/link_flows_to_their_substance ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v21 ef:flow/872b6653-b8f7-4508-af34-7d8502c53153/v22

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