Xylitol
Everything that changed this flow. Back to the flow
87a5d05f-9124-42ee-ae41-d8b0f0504d68
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 7 catalogue altLabel value(s): 'E 967' (grade code), 'NSC 25283' (registry code), 'X 0018' (grade code), 'Xylisorb 300' (trade name), 'Xylisorb 700' (trade name), 'Xylitab 100' (trade name), 'Xylitab 300' (trade name) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=87-99-0; cc_chebi_agreed_name='Xylitol'; object_uuid=fo-3fbc8ddbefea6309 |
| cas_match_labels | 1 | consensus_match | group_key=(2r,3r,4s)-pentane-1,2,3,4,5-pentol||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'87-99-0': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-3fbc8ddbefea6309: {'87-99-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['87-99-0']; matched_chebi_ids=[]; candidate_pubchem_cids=[827, 6912, 49822692]; selected_pubchem_cids=[827]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 5,969 | bootstrap_labels | prefLabel | — | [{"@value":"(2r, 3r, 4s)-pentane-1,2,3,4,5-pentol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels",… | Bootstrapped prefLabel from legacy name field |
| 5,970 | bootstrap_labels | name | (2r, 3r, 4s)-pentane-1,2,3,4,5-pentol | — | Purged legacy name field to enforce prefLabel usage |
| 5,971 | bootstrap_labels | synonyms | ["organic","xylitol","xylitolt"] | [] | Removed legacy synonyms field in favor of structured labels |
| 130,418 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 130,419 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 215,339 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 232,929 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1, commonchemistry_cas=['87-99-0']) |
| 232,930 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 232,931 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.453.993J","provenance":{"prov:wasGeneratedBy":"enrich_refer… | Added references with provenance; cas_numbers=['87-99-0']; matched_chebi_ids=[]; candidate_pubchem_cids=[827, 6912, 49822692]; selected_pubchem_cids=[827]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,979 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | rdkit_pre_consensus from 'C(C(C(C(CO)O)O)O)O'; added: molecular_mass, monoisotopic_mass |
| 255,134 | chebi_altlabels | altLabel | [] | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 257,658 | consensus_match | prefLabel | [{"@value":"(2r, 3r, 4s)-pentane-1,2,3,4,5-pentol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels",… | [{"@value":"Xylitol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… | cas=87-99-0; cc_chebi_agreed_name='Xylitol'; object_uuid=fo-3fbc8ddbefea6309 |
| 257,659 | consensus_match | altLabel | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | cas=87-99-0; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-3fbc8ddbefea6309 |
| 257,660 | consensus_match | altLabel | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | group_key=(2r,3r,4s)-pentane-1,2,3,4,5-pentol||dimension=Environmental > media=Water > water_body=Ocean; cas=87-99-0; added Common Chemistry CAS names as altLabel: <em>xylo</em>-Pentitol, <span class="text-smallcaps">D</smallcap><smallcap>L</span>-Xylitol, C-Xylidex CR 16055, E 967, Eutrit, Fluorette, Genencare XL, Klinit, Kylit, MeSH ID: D014993, NSC 25283, Wood sugar alcohol, X 0018, Xivia CM 90, Xylishine, Xylisorb, Xylisorb 300, Xylisorb 700, Xylit XC, Xylitab 100, Xylitab 300, Xylitab DC, Xylite (sugar), Xylite P, Xylitol C, Xylitol CM 90, Xylitol P, Xyliton; object_uuid=fo-3fbc8ddbefea6309 |
| 257,661 | consensus_match | cas_match_labels | — | {"87-99-0":"exactMatch"} | group_key=(2r,3r,4s)-pentane-1,2,3,4,5-pentol||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'87-99-0': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-3fbc8ddbefea6309: {'87-99-0': 'exactMatch'} |
| 275,126 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Xylitol' |
| 281,619 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | rdkit_post_consensus from 'OC[C@@H](O)[C@H](O)[C@@H](O)CO'; added: inchi2d_key_string; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,491 | strip_catalogue_altlabels | altLabel | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | [{"@value":"(2R,3R,4S)-Pentane-1,2,3,4,5-pentaol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… | Removed 7 catalogue altLabel value(s): 'E 967' (grade code), 'NSC 25283' (registry code), 'X 0018' (grade code), 'Xylisorb 300' (trade name), 'Xylisorb 700' (trade name), 'Xylitab 100' (trade name), 'Xylitab 300' (trade name) |
| 346,229 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/87a5d05f-9124-… | associations resolved on the elementary layer |
| 389,433 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | typed the way the ontology types it |
| 396,575 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,576 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12O5"],… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/5969 | prefLabel | ef:agent/bootstrap_labels | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v0 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v1 |
| ef:activity/change/20260820T0738569779880000/5970 | name | ef:agent/bootstrap_labels | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v1 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v2 |
| ef:activity/change/20260820T0738569779880000/5971 | synonyms | ef:agent/bootstrap_labels | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v2 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v3 |
| ef:activity/change/20260820T0738569779880000/130418 | context | ef:agent/default_context_mapping | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v3 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v4 |
| ef:activity/change/20260820T0738569779880000/130419 | context_iri | ef:agent/default_context_mapping | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v4 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v5 |
| ef:activity/change/20260820T0738569779880000/215339 | unit_iri | ef:agent/unit_normalization | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v5 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v6 |
| ef:activity/change/20260820T0738569779880000/232929 | properties | ef:agent/enrich_references | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v6 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v7 |
| ef:activity/change/20260820T0738569779880000/232930 | skos_definition | ef:agent/enrich_references | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v7 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v8 |
| ef:activity/change/20260820T0738569779880000/232931 | references | ef:agent/enrich_references | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v8 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v9 |
| ef:activity/change/20260820T0738569779880000/249979 | properties | ef:agent/rdkit_pre_consensus | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v9 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v10 |
| ef:activity/change/20260820T0738569779880000/255134 | altLabel | ef:agent/chebi_altlabels | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v10 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v11 |
| ef:activity/change/20260820T0738569779880000/257658 | prefLabel | ef:agent/consensus_match | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v11 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v12 |
| ef:activity/change/20260820T0738569779880000/257659 | altLabel | ef:agent/consensus_match | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v12 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v13 |
| ef:activity/change/20260820T0738569779880000/257660 | altLabel | ef:agent/consensus_match | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v13 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v14 |
| ef:activity/change/20260820T0738569779880000/257661 | cas_match_labels | ef:agent/consensus_match | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v14 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v15 |
| ef:activity/change/20260820T0738569779880000/275126 | properties | ef:agent/opsin_iupac | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v15 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v16 |
| ef:activity/change/20260820T0738569779880000/281619 | properties | ef:agent/rdkit_post_consensus | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v16 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v17 |
| ef:activity/change/20260820T0738569779880000/288491 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v17 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v18 |
| ef:activity/change/20260820T0738569779880000/346229 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v18 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v19 |
| ef:activity/change/20260820T0738569779880000/389433 | properties | ef:agent/normalise_property_values | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v19 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v20 |
| ef:activity/change/20260820T0738569779880000/396575 | types | ef:agent/link_flows_to_their_substance | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v20 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v21 |
| ef:activity/change/20260820T0738569779880000/396576 | properties | ef:agent/link_flows_to_their_substance | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v21 | ef:flow/87a5d05f-9124-42ee-ae41-d8b0f0504d68/v22 |