Zinc(2+)
Everything that changed this flow. Back to the flow
88c9e03c-eda2-4976-8cde-134c11064ae6
By field
12 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match | group_key=zinc(ii)||dimension=Environmental > media=Ground > geography=Agricultural; cas=23713-49-7; added Common Chemistry CAS names as altLabel: Zinc dication, Zinc divalent ion, Zinc ion(2+), Zinc(II), Zinc(II) ion; object_uuid=fo-2a649a3e6abb5944 |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=23713-49-7; cc_chebi_agreed_name='Zinc(2+)'; object_uuid=fo-2a649a3e6abb5944 |
| cas_match_labels | 1 | consensus_match | group_key=zinc(ii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'23713-49-7': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2a649a3e6abb5944: {'23713-49-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['23713-49-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29105']; candidate_pubchem_cids=[32051, 9910224]; selected_pubchem_cids=[32051]; formula_similarity_expected=['Zn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 2,277 | bootstrap_labels | prefLabel | — | [{"@value":"zinc (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 2,278 | bootstrap_labels | name | zinc (ii) | — | Purged legacy name field to enforce prefLabel usage |
| 131,068 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 131,069 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 214,104 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,619 | normalize_name_case | prefLabel | [{"@value":"zinc (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Zinc (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 229,378 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,379 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 229,380 | enrich_references | references | [] | [{"@id":"gmelin:6869","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… | Added references with provenance; cas_numbers=['23713-49-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29105']; candidate_pubchem_cids=[32051, 9910224]; selected_pubchem_cids=[32051]; formula_similarity_expected=['Zn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,959 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | rdkit_pre_consensus from '[Zn+2]'; added: monoisotopic_mass |
| 254,640 | chebi_altlabels | altLabel | [] | [{"@value":"ZINC ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 273,321 | consensus_match | prefLabel | [{"@value":"Zinc (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Zinc(2+)","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consen… | cas=23713-49-7; cc_chebi_agreed_name='Zinc(2+)'; object_uuid=fo-2a649a3e6abb5944 |
| 273,322 | consensus_match | altLabel | [{"@value":"ZINC ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | [{"@value":"ZINC ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | cas=23713-49-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-2a649a3e6abb5944 |
| 273,323 | consensus_match | altLabel | [{"@value":"ZINC ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | [{"@value":"ZINC ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… | group_key=zinc(ii)||dimension=Environmental > media=Ground > geography=Agricultural; cas=23713-49-7; added Common Chemistry CAS names as altLabel: Zinc dication, Zinc divalent ion, Zinc ion(2+), Zinc(II), Zinc(II) ion; object_uuid=fo-2a649a3e6abb5944 |
| 273,324 | consensus_match | cas_match_labels | — | {"23713-49-7":"exactMatch"} | group_key=zinc(ii)||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'23713-49-7': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-2a649a3e6abb5944: {'23713-49-7': 'exactMatch'} |
| 274,092 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Zinc(2+)' |
| 280,500 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | rdkit_post_consensus from '[Zn+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 346,554 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/88c9e03c-eda2-… | associations resolved on the elementary layer |
| 388,382 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | typed the way the ontology types it |
| 395,084 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/AtomCation"] | the substance's answer, copied onto its flow |
| 395,085 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Zn","Zn+2"… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/2277 | prefLabel | ef:agent/bootstrap_labels | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v0 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v1 |
| ef:activity/change/20260820T0738569779880000/2278 | name | ef:agent/bootstrap_labels | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v1 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v2 |
| ef:activity/change/20260820T0738569779880000/131068 | context | ef:agent/default_context_mapping | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v2 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v3 |
| ef:activity/change/20260820T0738569779880000/131069 | context_iri | ef:agent/default_context_mapping | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v3 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v4 |
| ef:activity/change/20260820T0738569779880000/214104 | unit_iri | ef:agent/unit_normalization | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v4 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v5 |
| ef:activity/change/20260820T0738569779880000/221619 | prefLabel | ef:agent/normalize_name_case | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v5 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v6 |
| ef:activity/change/20260820T0738569779880000/229378 | properties | ef:agent/enrich_references | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v6 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v7 |
| ef:activity/change/20260820T0738569779880000/229379 | skos_definition | ef:agent/enrich_references | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v7 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v8 |
| ef:activity/change/20260820T0738569779880000/229380 | references | ef:agent/enrich_references | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v8 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v9 |
| ef:activity/change/20260820T0738569779880000/248959 | properties | ef:agent/rdkit_pre_consensus | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v9 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v10 |
| ef:activity/change/20260820T0738569779880000/254640 | altLabel | ef:agent/chebi_altlabels | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v10 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v11 |
| ef:activity/change/20260820T0738569779880000/273321 | prefLabel | ef:agent/consensus_match | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v11 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v12 |
| ef:activity/change/20260820T0738569779880000/273322 | altLabel | ef:agent/consensus_match | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v12 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v13 |
| ef:activity/change/20260820T0738569779880000/273323 | altLabel | ef:agent/consensus_match | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v13 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v14 |
| ef:activity/change/20260820T0738569779880000/273324 | cas_match_labels | ef:agent/consensus_match | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v14 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v15 |
| ef:activity/change/20260820T0738569779880000/274092 | properties | ef:agent/opsin_iupac | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v15 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v16 |
| ef:activity/change/20260820T0738569779880000/280500 | properties | ef:agent/rdkit_post_consensus | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v16 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v17 |
| ef:activity/change/20260820T0738569779880000/346554 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v17 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v18 |
| ef:activity/change/20260820T0738569779880000/388382 | properties | ef:agent/normalise_property_values | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v18 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v19 |
| ef:activity/change/20260820T0738569779880000/395084 | types | ef:agent/link_flows_to_their_substance | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v19 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v20 |
| ef:activity/change/20260820T0738569779880000/395085 | properties | ef:agent/link_flows_to_their_substance | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v20 | ef:flow/88c9e03c-eda2-4976-8cde-134c11064ae6/v21 |