Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=65-30-5; cc_chebi_agreed_name='Nicotine sulfate'; object_uuid=fo-e6a4cf458af75b8d
cas_match_labels 1 consensus_match group_key=nicotinesulphate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'65-30-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e6a4cf458af75b8d: {'65-30-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['65-30-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_232650']; candidate_pubchem_cids=[6173, 221264, 2735101, 5284498]; selected_pubchem_cids=[2735101]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
3,759 bootstrap_labels prefLabel [{"@value":"nicotine sulphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Bootstrapped prefLabel from legacy name field
3,760 bootstrap_labels name nicotine sulphate Purged legacy name field to enforce prefLabel usage
3,761 bootstrap_labels synonyms ["(S)-3-(1-Methyl-2-pyrrolidinyl)pyridine sulfate (2:1)","3-(1-methylpyrrolidin-2-yl)pyridine","3-(1-methylpyrrolidin-2… [] Removed legacy synonyms field in favor of structured labels
131,260 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
131,261 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
214,597 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,960 normalize_name_case prefLabel [{"@value":"nicotine sulphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,806 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,807 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
230,808 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.000.551","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['65-30-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_232650']; candidate_pubchem_cids=[6173, 221264, 2735101, 5284498]; selected_pubchem_cids=[2735101]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,364 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… rdkit_pre_consensus from 'CN1CCCC1C2=CN=CC=C2.CN1CCCC1C2=CN=CC=C2.OS(=O)(=O)O'; added: inchi2d_string, monoisotopic_mass
269,857 consensus_match prefLabel [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Nicotine sulfate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=65-30-5; cc_chebi_agreed_name='Nicotine sulfate'; object_uuid=fo-e6a4cf458af75b8d
269,858 consensus_match altLabel [] [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… cas=65-30-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-e6a4cf458af75b8d
269,859 consensus_match altLabel [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… group_key=nicotinesulphate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=65-30-5; added Common Chemistry CAS names as altLabel: Black Leaf 40, Nicotine, sulfate (2:1), Pyridine, 3-(1-methyl-2-pyrrolidinyl)-, (<em>S</em>)-, sulfate (2:1), Pyridine, 3-[(2<em>S</em>)-1-methyl-2-pyrrolidinyl]-, sulfate (2:1); object_uuid=fo-e6a4cf458af75b8d
269,860 consensus_match cas_match_labels {"65-30-5":"exactMatch"} group_key=nicotinesulphate||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'65-30-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e6a4cf458af75b8d: {'65-30-5': 'exactMatch'}
280,938 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… rdkit_post_consensus from 'CN1CCCC1C2=CN=CC=C2.CN1CCCC1C2=CN=CC=C2.OS(=O)(=O)O'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
292,169 dedupe_altlabels altLabel [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… [{"@value":"Nicotine Sulphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo… Deduplicated altLabel values and removed entries matching prefLabel
346,630 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/8926a402-fc30-… associations resolved on the elementary layer
388,795 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… typed the way the ontology types it
395,676 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularComplex"] the substance's answer, copied onto its flow
395,677 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2C10H14N2.… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/3759 prefLabel ef:agent/bootstrap_labels ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v0 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v1
ef:activity/change/20260822T0600486828500000/3760 name ef:agent/bootstrap_labels ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v1 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v2
ef:activity/change/20260822T0600486828500000/3761 synonyms ef:agent/bootstrap_labels ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v2 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v3
ef:activity/change/20260822T0600486828500000/131260 context ef:agent/default_context_mapping ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v3 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v4
ef:activity/change/20260822T0600486828500000/131261 context_iri ef:agent/default_context_mapping ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v4 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v5
ef:activity/change/20260822T0600486828500000/214597 unit_iri ef:agent/unit_normalization ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v5 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v6
ef:activity/change/20260822T0600486828500000/221960 prefLabel ef:agent/normalize_name_case ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v6 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v7
ef:activity/change/20260822T0600486828500000/230806 properties ef:agent/enrich_references ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v7 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v8
ef:activity/change/20260822T0600486828500000/230807 skos_definition ef:agent/enrich_references ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v8 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v9
ef:activity/change/20260822T0600486828500000/230808 references ef:agent/enrich_references ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v9 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v10
ef:activity/change/20260822T0600486828500000/249364 properties ef:agent/rdkit_pre_consensus ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v10 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v11
ef:activity/change/20260822T0600486828500000/269857 prefLabel ef:agent/consensus_match ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v11 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v12
ef:activity/change/20260822T0600486828500000/269858 altLabel ef:agent/consensus_match ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v12 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v13
ef:activity/change/20260822T0600486828500000/269859 altLabel ef:agent/consensus_match ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v13 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v14
ef:activity/change/20260822T0600486828500000/269860 cas_match_labels ef:agent/consensus_match ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v14 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v15
ef:activity/change/20260822T0600486828500000/280938 properties ef:agent/rdkit_post_consensus ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v15 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v16
ef:activity/change/20260822T0600486828500000/292169 altLabel ef:agent/dedupe_altlabels ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v16 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v17
ef:activity/change/20260822T0600486828500000/346630 concept_associations ef:agent/carry_associations_onto_flows ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v17 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v18
ef:activity/change/20260822T0600486828500000/388795 properties ef:agent/normalise_property_values ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v18 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v19
ef:activity/change/20260822T0600486828500000/395676 types ef:agent/link_flows_to_their_substance ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v19 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v20
ef:activity/change/20260822T0600486828500000/395677 properties ef:agent/link_flows_to_their_substance ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v20 ef:flow/8926a402-fc30-4adf-bafc-71b2bd0f3de1/v21

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