Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 10 catalogue altLabel value(s): 'BAS 3170' (grade code), 'BAS 31700F' (grade code), 'BAS 31702F' (grade code), 'BAS 31708F' (grade code), 'BAS 31709' (grade code), 'BAS 3170F' (grade code), 'BAS 3172F' (grade code), 'BAS-3170' (grade code), 'BASF 31709F' (grade code), 'NSC 100499' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=benodanil||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'15310-01-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e521874ea1ca1332: {'15310-01-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['15310-01-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82052']; candidate_pubchem_cids=[27195]; selected_pubchem_cids=[27195]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
1,841 bootstrap_labels prefLabel [{"@value":"benodanil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
1,842 bootstrap_labels name benodanil Purged legacy name field to enforce prefLabel usage
1,843 bootstrap_labels synonyms ["2-IODOBENZANILIDE","2-Iodo-N-phenylbenzamide","2-Iodobenzanilide (8CI)","2-Iodobenzanilide (8CI)(9CI)","2-Iodobenzoic… [] Removed legacy synonyms field in favor of structured labels
133,306 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
133,307 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
213,958 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,526 normalize_name_case prefLabel [{"@value":"benodanil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Benodanil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,958 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,959 enrich_references skos_definition [{"@value":"A member of the class of benzamides, obtained by formal condensation of the carboxy group of 2-iodobenzoic… Merged ChEBI/PubChem definitions into skos:definition
228,960 enrich_references references [] [{"@id":"agr:GUA85008832","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['15310-01-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82052']; candidate_pubchem_cids=[27195]; selected_pubchem_cids=[27195]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,833 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… rdkit_pre_consensus from 'C1=CC=C(C=C1)NC(=O)C2=CC=CC=C2I'; added: monoisotopic_mass
254,601 chebi_altlabels altLabel [] [{"@value":"2-Iodobenzanilide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,063 consensus_match altLabel [{"@value":"2-Iodobenzanilide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"2-Iodobenzanilide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… group_key=benodanil||dimension=Environmental > media=Water > water_body=Surface water; cas=15310-01-7; added Common Chemistry CAS names as altLabel: 2-Iodo-<em>N</em>-phenylbenzamide, <em>o</em>-Iodobenzanilide, BAS 3170, BAS 31700F, BAS 31702F, BAS 31708F, BAS 31709, BAS 3172F, BASF 31709F, Benefit, Benodanyl, Benzamide, 2-iodo-<em>N</em>-phenyl-, Benzanilide, 2-iodo-, Calirus, NSC 100499; object_uuid=fo-e521874ea1ca1332
264,064 consensus_match cas_match_labels {"15310-01-7":"exactMatch"} group_key=benodanil||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'15310-01-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e521874ea1ca1332: {'15310-01-7': 'exactMatch'}
273,968 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-Iodobenzanilide'
280,366 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… rdkit_post_consensus from 'O=C(Nc1ccccc1)c1ccccc1I'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,641 strip_catalogue_altlabels altLabel [{"@value":"2-Iodobenzanilide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"2-Iodobenzanilide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Removed 10 catalogue altLabel value(s): 'BAS 3170' (grade code), 'BAS 31700F' (grade code), 'BAS 31702F' (grade code), 'BAS 31708F' (grade code), 'BAS 31709' (grade code), 'BAS 3170F' (grade code), 'BAS 3172F' (grade code), 'BAS-3170' (grade code), 'BASF 31709F' (grade code), 'NSC 100499' (registry code)
347,668 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/8c4b427d-1a70-… associations resolved on the elementary layer
388,260 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C13H10INO"… typed the way the ontology types it
394,909 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,910 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/1841 prefLabel ef:agent/bootstrap_labels ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v0 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v1
ef:activity/change/20260820T0738569779880000/1842 name ef:agent/bootstrap_labels ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v1 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v2
ef:activity/change/20260820T0738569779880000/1843 synonyms ef:agent/bootstrap_labels ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v2 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v3
ef:activity/change/20260820T0738569779880000/133306 context ef:agent/default_context_mapping ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v3 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v4
ef:activity/change/20260820T0738569779880000/133307 context_iri ef:agent/default_context_mapping ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v4 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v5
ef:activity/change/20260820T0738569779880000/213958 unit_iri ef:agent/unit_normalization ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v5 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v6
ef:activity/change/20260820T0738569779880000/221526 prefLabel ef:agent/normalize_name_case ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v6 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v7
ef:activity/change/20260820T0738569779880000/228958 properties ef:agent/enrich_references ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v7 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v8
ef:activity/change/20260820T0738569779880000/228959 skos_definition ef:agent/enrich_references ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v8 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v9
ef:activity/change/20260820T0738569779880000/228960 references ef:agent/enrich_references ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v9 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v10
ef:activity/change/20260820T0738569779880000/248833 properties ef:agent/rdkit_pre_consensus ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v10 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v11
ef:activity/change/20260820T0738569779880000/254601 altLabel ef:agent/chebi_altlabels ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v11 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v12
ef:activity/change/20260820T0738569779880000/264063 altLabel ef:agent/consensus_match ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v12 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v13
ef:activity/change/20260820T0738569779880000/264064 cas_match_labels ef:agent/consensus_match ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v13 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v14
ef:activity/change/20260820T0738569779880000/273968 properties ef:agent/opsin_iupac ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v14 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v15
ef:activity/change/20260820T0738569779880000/280366 properties ef:agent/rdkit_post_consensus ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v15 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v16
ef:activity/change/20260820T0738569779880000/287641 altLabel ef:agent/strip_catalogue_altlabels ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v16 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v17
ef:activity/change/20260820T0738569779880000/347668 concept_associations ef:agent/carry_associations_onto_flows ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v17 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v18
ef:activity/change/20260820T0738569779880000/388260 properties ef:agent/normalise_property_values ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v18 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v19
ef:activity/change/20260820T0738569779880000/394909 types ef:agent/link_flows_to_their_substance ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v19 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v20
ef:activity/change/20260820T0738569779880000/394910 roles ef:agent/link_flows_to_their_substance ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v20 ef:flow/8c4b427d-1a70-4276-b611-7e0ce66171b3/v21

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