Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=2-(otanoylamino)aceticacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'14246-53-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-baedc407f8330cbd: {'14246-53-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['14246-53-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_74099']; candidate_pubchem_cids=[84290, 119234, 350339, 11008972]; selected_pubchem_cids=[84290]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
19,441 bootstrap_labels prefLabel [{"@value":"2-(otanoylamino)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… Bootstrapped prefLabel from legacy name field
19,442 bootstrap_labels name 2-(otanoylamino)acetic acid Purged legacy name field to enforce prefLabel usage
19,443 bootstrap_labels synonyms ["organic","n-(1-oxooctyl)glycine"] [] Removed legacy synonyms field in favor of structured labels
133,550 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
133,551 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
219,666 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,506 normalize_name_case prefLabel [{"@value":"2-(otanoylamino)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… [{"@value":"2-(otanoylamino)acetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasA… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,248 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,249 enrich_references skos_definition [{"@value":"An N-acylglycine that has octanoyl as the acyl group.","@language":"en","provenance":{"prov:wasGeneratedBy"… Merged ChEBI/PubChem definitions into skos:definition
245,250 enrich_references references [] [{"@id":"foodb.food:FDB022273","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… Added references with provenance; cas_numbers=['14246-53-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_74099']; candidate_pubchem_cids=[84290, 119234, 350339, 11008972]; selected_pubchem_cids=[84290]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,525 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… rdkit_pre_consensus from 'CCCCCCCC(=O)NCC(=O)O'; added: monoisotopic_mass
256,905 chebi_altlabels altLabel [] [{"@value":"2-octanamidoacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
260,368 consensus_match altLabel [{"@value":"2-octanamidoacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"2-octanamidoacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… group_key=2-(otanoylamino)aceticacid||dimension=Environmental > media=Water > water_body=Ocean; cas=14246-53-8; added Common Chemistry CAS names as altLabel: <em>N</em>-Octanoyl-glycine, Glycine, <em>N</em>-(1-oxooctyl)-, Glycine, <em>N</em>-octanoyl-, Lipacide C 8G, Octanoylglycine; object_uuid=fo-baedc407f8330cbd
260,369 consensus_match cas_match_labels {"14246-53-8":"exactMatch"} group_key=2-(otanoylamino)aceticacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory']; cas_sources={'14246-53-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-baedc407f8330cbd: {'14246-53-8': 'exactMatch'}
278,737 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-octanamidoacetic acid'
285,519 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… rdkit_post_consensus from 'CCCCCCCC(=O)NCC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,025 dedupe_altlabels altLabel [{"@value":"2-octanamidoacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"2-octanamidoacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Deduplicated altLabel values and removed entries matching prefLabel
347,764 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/8cbd2104-5281-… associations resolved on the elementary layer
393,100 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H19NO3"… typed the way the ontology types it
401,884 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/19441 prefLabel ef:agent/bootstrap_labels ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v0 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v1
ef:activity/change/20260821T0609040591070000/19442 name ef:agent/bootstrap_labels ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v1 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v2
ef:activity/change/20260821T0609040591070000/19443 synonyms ef:agent/bootstrap_labels ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v2 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v3
ef:activity/change/20260821T0609040591070000/133550 context ef:agent/default_context_mapping ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v3 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v4
ef:activity/change/20260821T0609040591070000/133551 context_iri ef:agent/default_context_mapping ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v4 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v5
ef:activity/change/20260821T0609040591070000/219666 unit_iri ef:agent/unit_normalization ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v5 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v6
ef:activity/change/20260821T0609040591070000/225506 prefLabel ef:agent/normalize_name_case ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v6 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v7
ef:activity/change/20260821T0609040591070000/245248 properties ef:agent/enrich_references ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v7 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v8
ef:activity/change/20260821T0609040591070000/245249 skos_definition ef:agent/enrich_references ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v8 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v9
ef:activity/change/20260821T0609040591070000/245250 references ef:agent/enrich_references ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v9 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v10
ef:activity/change/20260821T0609040591070000/253525 properties ef:agent/rdkit_pre_consensus ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v10 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v11
ef:activity/change/20260821T0609040591070000/256905 altLabel ef:agent/chebi_altlabels ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v11 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v12
ef:activity/change/20260821T0609040591070000/260368 altLabel ef:agent/consensus_match ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v12 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v13
ef:activity/change/20260821T0609040591070000/260369 cas_match_labels ef:agent/consensus_match ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v13 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v14
ef:activity/change/20260821T0609040591070000/278737 properties ef:agent/opsin_iupac ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v14 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v15
ef:activity/change/20260821T0609040591070000/285519 properties ef:agent/rdkit_post_consensus ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v15 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v16
ef:activity/change/20260821T0609040591070000/293025 altLabel ef:agent/dedupe_altlabels ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v16 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v17
ef:activity/change/20260821T0609040591070000/347764 concept_associations ef:agent/carry_associations_onto_flows ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v17 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v18
ef:activity/change/20260821T0609040591070000/393100 properties ef:agent/normalise_property_values ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v18 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v19
ef:activity/change/20260821T0609040591070000/401884 types ef:agent/link_flows_to_their_substance ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v19 ef:flow/8cbd2104-5281-4750-94bf-2ab26467aa1a/v20

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