Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=dl-menthol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['ec_inventory', 'pubchem']; cas_sources={'1490-04-6': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b1c4ddaec8411e77: {'1490-04-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1490-04-6']; matched_chebi_ids=[]; candidate_pubchem_cids=[1254, 16666]; selected_pubchem_cids=[1254]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,000 bootstrap_labels prefLabel [{"@value":"dl-menthol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
10,001 bootstrap_labels name dl-menthol Purged legacy name field to enforce prefLabel usage
10,002 bootstrap_labels synonyms ["organic","dl-menthol","cyclohexanol,5-methyl-2-(1-methylethyl)-","menthol"] [] Removed legacy synonyms field in favor of structured labels
135,108 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
135,109 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
216,661 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,435 normalize_name_case prefLabel [{"@value":"dl-menthol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Dl-menthol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
236,731 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
236,732 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
236,733 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.129F","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['1490-04-6']; matched_chebi_ids=[]; candidate_pubchem_cids=[1254, 16666]; selected_pubchem_cids=[1254]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,063 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… rdkit_pre_consensus from 'CC1CCC(C(C1)O)C(C)C'; added: molecular_mass, monoisotopic_mass
266,572 consensus_match altLabel [] [{"@value":"1-Methyl-4-isopropyl-3-cyclohexanol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","pr… group_key=dl-menthol||dimension=Environmental > media=Air > indoor=Unknown; cas=1490-04-6; added Common Chemistry CAS names as altLabel: 1-Methyl-4-isopropyl-3-cyclohexanol, 2-(2-Propyl)-5-methyl-1-cyclohexanol, 2-Isopropyl-5-methylcyclohexan-1-ol, 2-Isopropyl-5-methylcyclohexanol, 3-Hydroxy-<em>p</em>-menthane, 5-Methyl-2-(1-methylethyl)cyclohexanol, 5-Methyl-2-isopropylcyclohexanol, <em>p</em>-Menthan-3-ol, Cyclohexanol, 5-methyl-2-(1-methylethyl)-, MeSH ID: D008610, Menthol, Menthyl alcohol; object_uuid=fo-b1c4ddaec8411e77
266,573 consensus_match cas_match_labels {"1490-04-6":"exactMatch"} group_key=dl-menthol||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['ec_inventory', 'pubchem']; cas_sources={'1490-04-6': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b1c4ddaec8411e77: {'1490-04-6': 'exactMatch'}
276,250 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-Methyl-4-isopropyl-3-cyclohexanol'
282,837 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… rdkit_post_consensus from 'CC1CCC(C(C)C)C(O)C1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,481 dedupe_altlabels altLabel [{"@value":"1-Methyl-4-isopropyl-3-cyclohexanol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","pr… [{"@value":"1-Methyl-4-isopropyl-3-cyclohexanol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","pr… Deduplicated altLabel values and removed entries matching prefLabel
348,550 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/8f8ee157-c7de-… associations resolved on the elementary layer
390,594 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H20O"],… typed the way the ontology types it
398,266 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/10000 prefLabel ef:agent/bootstrap_labels ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v0 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v1
ef:activity/change/20260822T0600486828500000/10001 name ef:agent/bootstrap_labels ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v1 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v2
ef:activity/change/20260822T0600486828500000/10002 synonyms ef:agent/bootstrap_labels ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v2 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v3
ef:activity/change/20260822T0600486828500000/135108 context ef:agent/default_context_mapping ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v3 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v4
ef:activity/change/20260822T0600486828500000/135109 context_iri ef:agent/default_context_mapping ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v4 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v5
ef:activity/change/20260822T0600486828500000/216661 unit_iri ef:agent/unit_normalization ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v5 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v6
ef:activity/change/20260822T0600486828500000/223435 prefLabel ef:agent/normalize_name_case ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v6 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v7
ef:activity/change/20260822T0600486828500000/236731 properties ef:agent/enrich_references ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v7 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v8
ef:activity/change/20260822T0600486828500000/236732 skos_definition ef:agent/enrich_references ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v8 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v9
ef:activity/change/20260822T0600486828500000/236733 references ef:agent/enrich_references ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v9 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v10
ef:activity/change/20260822T0600486828500000/251063 properties ef:agent/rdkit_pre_consensus ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v10 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v11
ef:activity/change/20260822T0600486828500000/266572 altLabel ef:agent/consensus_match ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v11 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v12
ef:activity/change/20260822T0600486828500000/266573 cas_match_labels ef:agent/consensus_match ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v12 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v13
ef:activity/change/20260822T0600486828500000/276250 properties ef:agent/opsin_iupac ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v13 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v14
ef:activity/change/20260822T0600486828500000/282837 properties ef:agent/rdkit_post_consensus ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v14 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v15
ef:activity/change/20260822T0600486828500000/292481 altLabel ef:agent/dedupe_altlabels ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v15 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v16
ef:activity/change/20260822T0600486828500000/348550 concept_associations ef:agent/carry_associations_onto_flows ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v16 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v17
ef:activity/change/20260822T0600486828500000/390594 properties ef:agent/normalise_property_values ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v17 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v18
ef:activity/change/20260822T0600486828500000/398266 types ef:agent/link_flows_to_their_substance ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v18 ef:flow/8f8ee157-c7de-4182-a986-2ccc0727db01/v19

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