Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=22541-90-8; cc_chebi_agreed_name='Tin(2+)'; object_uuid=fo-ea07cf34366f8fc0
cas_match_labels 1 consensus_match group_key=tin(ii)||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi']; cas_sources={'22541-90-8': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-ea07cf34366f8fc0: {'22541-90-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['22541-90-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30475']; candidate_pubchem_cids=[104883, 255363]; selected_pubchem_cids=[104883]; formula_similarity_expected=['Sn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
1,759 bootstrap_labels prefLabel [{"@value":"tin (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
1,760 bootstrap_labels name tin (ii) Purged legacy name field to enforce prefLabel usage
1,761 bootstrap_labels synonyms ["element in usetox"] [] Removed legacy synonyms field in favor of structured labels
135,740 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
135,741 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
213,931 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,507 normalize_name_case prefLabel [{"@value":"tin (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Tin (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,881 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,882 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
228,883 enrich_references references [] [{"@id":"gmelin:6867","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['22541-90-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30475']; candidate_pubchem_cids=[104883, 255363]; selected_pubchem_cids=[104883]; formula_similarity_expected=['Sn']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,812 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… rdkit_pre_consensus from '[Sn+2]'; added: monoisotopic_mass
254,593 chebi_altlabels altLabel [] [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,648 consensus_match prefLabel [{"@value":"Tin (ii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Tin(2+)","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… cas=22541-90-8; cc_chebi_agreed_name='Tin(2+)'; object_uuid=fo-ea07cf34366f8fc0
272,649 consensus_match altLabel [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… cas=22541-90-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-ea07cf34366f8fc0
272,650 consensus_match altLabel [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… group_key=tin(ii)||dimension=Environmental > media=Water > water_body=Unknown; cas=22541-90-8; added Common Chemistry CAS names as altLabel: Sn<sup>2+</sup>, Stannous ion, Tin dication; object_uuid=fo-ea07cf34366f8fc0
272,651 consensus_match cas_match_labels {"22541-90-8":"exactMatch"} group_key=tin(ii)||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi']; cas_sources={'22541-90-8': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-ea07cf34366f8fc0: {'22541-90-8': 'exactMatch'}
273,947 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Tin(2+)'
280,343 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… rdkit_post_consensus from '[Sn+2]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,076 dedupe_altlabels altLabel [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Sn(2+)","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Deduplicated altLabel values and removed entries matching prefLabel
348,886 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/90a6b4d4-f6e1-… associations resolved on the elementary layer
388,237 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… typed the way the ontology types it
394,879 link_flows_to_their_substance types ["https://w3id.org/chemrof/AtomCation"] the substance's answer, copied onto its flow
394,880 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Sn","Sn+2"… the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/1759 prefLabel ef:agent/bootstrap_labels ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v0 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v1
ef:activity/change/20260820T0738569779880000/1760 name ef:agent/bootstrap_labels ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v1 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v2
ef:activity/change/20260820T0738569779880000/1761 synonyms ef:agent/bootstrap_labels ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v2 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v3
ef:activity/change/20260820T0738569779880000/135740 context ef:agent/default_context_mapping ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v3 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v4
ef:activity/change/20260820T0738569779880000/135741 context_iri ef:agent/default_context_mapping ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v4 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v5
ef:activity/change/20260820T0738569779880000/213931 unit_iri ef:agent/unit_normalization ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v5 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v6
ef:activity/change/20260820T0738569779880000/221507 prefLabel ef:agent/normalize_name_case ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v6 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v7
ef:activity/change/20260820T0738569779880000/228881 properties ef:agent/enrich_references ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v7 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v8
ef:activity/change/20260820T0738569779880000/228882 skos_definition ef:agent/enrich_references ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v8 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v9
ef:activity/change/20260820T0738569779880000/228883 references ef:agent/enrich_references ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v9 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v10
ef:activity/change/20260820T0738569779880000/248812 properties ef:agent/rdkit_pre_consensus ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v10 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v11
ef:activity/change/20260820T0738569779880000/254593 altLabel ef:agent/chebi_altlabels ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v11 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v12
ef:activity/change/20260820T0738569779880000/272648 prefLabel ef:agent/consensus_match ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v12 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v13
ef:activity/change/20260820T0738569779880000/272649 altLabel ef:agent/consensus_match ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v13 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v14
ef:activity/change/20260820T0738569779880000/272650 altLabel ef:agent/consensus_match ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v14 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v15
ef:activity/change/20260820T0738569779880000/272651 cas_match_labels ef:agent/consensus_match ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v15 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v16
ef:activity/change/20260820T0738569779880000/273947 properties ef:agent/opsin_iupac ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v16 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v17
ef:activity/change/20260820T0738569779880000/280343 properties ef:agent/rdkit_post_consensus ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v17 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v18
ef:activity/change/20260820T0738569779880000/292076 altLabel ef:agent/dedupe_altlabels ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v18 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v19
ef:activity/change/20260820T0738569779880000/348886 concept_associations ef:agent/carry_associations_onto_flows ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v19 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v20
ef:activity/change/20260820T0738569779880000/388237 properties ef:agent/normalise_property_values ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v20 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v21
ef:activity/change/20260820T0738569779880000/394879 types ef:agent/link_flows_to_their_substance ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v21 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v22
ef:activity/change/20260820T0738569779880000/394880 properties ef:agent/link_flows_to_their_substance ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v22 ef:flow/90a6b4d4-f6e1-4fe9-ab48-9b1203a50a19/v23

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