Consensus flow list

By field

15 fields
Field Changes Written by Latest note
altLabel 5 chebi_altlabels, consensus_match, strip_catalogue_altlabels, strip_cross_object_altlabels Removed 7 catalogue altLabel value(s): 'A 3000' (grade code), 'F 30' (grade code), 'F 30 (chlorocarbon)' (grade code), 'HCC 30' (grade code), 'NSC 406122' (registry code), 'R 30' (grade code), 'R 30 (refrigerant)' (grade code)
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=75-09-2; cc_chebi_agreed_name='Dichloromethane'; object_uuid=fo-067b5f2cd91dfd1d
cas_match_labels 1 consensus_match group_key=dichloromethane||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-09-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-067b5f2cd91dfd1d: {'75-09-2': 'exactMatch'}
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
dcterms_is_replaced_by 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 200-838-9 from CAS 75-09-2
is_replaced_by_uuid 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
owl_deprecated 1 pipeline.deduplication duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
references 1 enrich_references Added references with provenance; cas_numbers=['75-09-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15767']; candidate_pubchem_cids=[6344]; selected_pubchem_cids=[6344]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

25
# Step Field From To Why
1,574 bootstrap_labels prefLabel [{"@value":"Methylene chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
1,575 bootstrap_labels name Methylene chloride Purged legacy name field to enforce prefLabel usage
35,084 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
35,085 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
213,862 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,454 normalize_name_case prefLabel [{"@value":"Methylene chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Methylene Chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,721 ec_cross_check ec_numbers [] ["200-838-9"] Resolved from EC-inventory: 200-838-9 from CAS 75-09-2
228,693 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,694 enrich_references skos_definition [{"@value":"A member of the class of chloromethanes that is methane in which two of the hydrogens have been replaced by… Merged ChEBI/PubChem definitions into skos:definition
228,695 enrich_references references [] [{"@id":"gmelin:1302","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['75-09-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15767']; candidate_pubchem_cids=[6344]; selected_pubchem_cids=[6344]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,752 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… rdkit_pre_consensus from 'C(Cl)Cl'; added: monoisotopic_mass
254,562 chebi_altlabels altLabel [] [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,410 strip_cross_object_altlabels altLabel [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: 'Dichloromethane'
265,831 consensus_match prefLabel [{"@value":"Methylene Chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Dichloromethane","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… cas=75-09-2; cc_chebi_agreed_name='Dichloromethane'; object_uuid=fo-067b5f2cd91dfd1d
265,832 consensus_match altLabel [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… cas=75-09-2; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-067b5f2cd91dfd1d
265,833 consensus_match altLabel [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=dichloromethane||dimension=Environmental > media=Air > indoor=Unknown; cas=75-09-2; added Common Chemistry CAS names as altLabel: A 3000, Aerothene MM, F 30, F 30 (chlorocarbon), Freon 30, HCC 30, Khladon 30, MeSH ID: D008752, Metaclen, Methaclean U, Methane, dichloro-, NSC 406122, Narkotil, R 30, R 30 (refrigerant), Solaesthin, Soleana VDA, Solmethine; object_uuid=fo-067b5f2cd91dfd1d
265,835 consensus_match cas_match_labels {"75-09-2":"exactMatch"} group_key=dichloromethane||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'75-09-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-067b5f2cd91dfd1d: {'75-09-2': 'exactMatch'}
273,873 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Dichloromethane'
280,262 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… rdkit_post_consensus from 'ClCCl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,564 strip_catalogue_altlabels altLabel [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"DCM","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 7 catalogue altLabel value(s): 'A 3000' (grade code), 'F 30' (grade code), 'F 30 (chlorocarbon)' (grade code), 'HCC 30' (grade code), 'NSC 406122' (registry code), 'R 30' (grade code), 'R 30 (refrigerant)' (grade code)
293,446 pipeline.deduplication owl_deprecated yes duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
293,447 pipeline.deduplication dcterms_is_replaced_by urn:uuid:08a91e70-3ddc-11dd-961c-0050c2490048 duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
293,448 pipeline.deduplication is_replaced_by_uuid 08a91e70-3ddc-11dd-961c-0050c2490048 duplicate of 08a91e70-3ddc-11dd-961c-0050c2490048
388,156 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH2Cl2"],"… typed the way the ontology types it
394,775 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

25 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/1574 prefLabel ef:agent/bootstrap_labels ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v0 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v1
ef:activity/change/20260820T1812399309960000/1575 name ef:agent/bootstrap_labels ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v1 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v2
ef:activity/change/20260820T1812399309960000/35084 context ef:agent/default_context_mapping ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v2 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v3
ef:activity/change/20260820T1812399309960000/35085 context_iri ef:agent/default_context_mapping ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v3 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v4
ef:activity/change/20260820T1812399309960000/213862 unit_iri ef:agent/unit_normalization ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v4 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v5
ef:activity/change/20260820T1812399309960000/221454 prefLabel ef:agent/normalize_name_case ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v5 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v6
ef:activity/change/20260820T1812399309960000/226721 ec_numbers ef:agent/ec_cross_check ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v6 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v7
ef:activity/change/20260820T1812399309960000/228693 properties ef:agent/enrich_references ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v7 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v8
ef:activity/change/20260820T1812399309960000/228694 skos_definition ef:agent/enrich_references ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v8 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v9
ef:activity/change/20260820T1812399309960000/228695 references ef:agent/enrich_references ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v9 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v10
ef:activity/change/20260820T1812399309960000/248752 properties ef:agent/rdkit_pre_consensus ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v10 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v11
ef:activity/change/20260820T1812399309960000/254562 altLabel ef:agent/chebi_altlabels ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v11 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v12
ef:activity/change/20260820T1812399309960000/257410 altLabel ef:agent/strip_cross_object_altlabels ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v12 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v13
ef:activity/change/20260820T1812399309960000/265831 prefLabel ef:agent/consensus_match ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v13 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v14
ef:activity/change/20260820T1812399309960000/265832 altLabel ef:agent/consensus_match ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v14 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v15
ef:activity/change/20260820T1812399309960000/265833 altLabel ef:agent/consensus_match ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v15 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v16
ef:activity/change/20260820T1812399309960000/265835 cas_match_labels ef:agent/consensus_match ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v16 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v17
ef:activity/change/20260820T1812399309960000/273873 properties ef:agent/opsin_iupac ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v17 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v18
ef:activity/change/20260820T1812399309960000/280262 properties ef:agent/rdkit_post_consensus ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v18 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v19
ef:activity/change/20260820T1812399309960000/287564 altLabel ef:agent/strip_catalogue_altlabels ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v19 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v20
ef:activity/change/20260820T1812399309960000/293446 owl_deprecated ef:agent/pipeline.deduplication ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v20 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v21
ef:activity/change/20260820T1812399309960000/293447 dcterms_is_replaced_by ef:agent/pipeline.deduplication ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v21 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v22
ef:activity/change/20260820T1812399309960000/293448 is_replaced_by_uuid ef:agent/pipeline.deduplication ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v22 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v23
ef:activity/change/20260820T1812399309960000/388156 properties ef:agent/normalise_property_values ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v23 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v24
ef:activity/change/20260820T1812399309960000/394775 types ef:agent/link_flows_to_their_substance ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v24 ef:flow/90e2128b-1510-4a86-9800-df6fdb98a1fb/v25

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