Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 5 catalogue altLabel value(s): 'BI 12' (grade code), 'HP 55' (grade code), 'NSC 8769' (registry code), 'NSC 9213' (registry code), 'P 10' (grade code)
prefLabel 2 bootstrap_labels, consensus_match cas=122-88-3; cc_chebi_agreed_name='(4-Chlorophenoxy)acetic acid'; object_uuid=fo-8f05438d654783e5
cas_match_labels 1 consensus_match group_key=4-cpa||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'122-88-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8f05438d654783e5: {'122-88-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['122-88-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_1808']; candidate_pubchem_cids=[26229, 3794534]; selected_pubchem_cids=[26229]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
9,602 bootstrap_labels prefLabel [{"@value":"4-CPA","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… Bootstrapped prefLabel from legacy name field
9,603 bootstrap_labels name 4-CPA Purged legacy name field to enforce prefLabel usage
9,604 bootstrap_labels synonyms ["(4-Chlorophenoxy)acetic acid","(p-Chlorophenoxy)acetic acid","2-(4-chlorophenoxy)acetic acid","4-CHLOROPHENOXYACETIC… [] Removed legacy synonyms field in favor of structured labels
136,090 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
136,091 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
213,834 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
228,604 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,605 enrich_references skos_definition [{"@value":"A chlorophenoxyacetic acid that is phenoxyacetic acid carrying a chloro substituent at position 4.","@langu… Merged ChEBI/PubChem definitions into skos:definition
228,606 enrich_references references [] [{"@id":"gmelin:397082","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['122-88-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_1808']; candidate_pubchem_cids=[26229, 3794534]; selected_pubchem_cids=[26229]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,731 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… rdkit_pre_consensus from 'C1=CC(=CC=C1OCC(=O)O)Cl'; added: monoisotopic_mass
254,558 chebi_altlabels altLabel [] [{"@value":"(4-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
262,702 consensus_match prefLabel [{"@value":"4-CPA","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consensu… [{"@value":"(4-Chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasA… cas=122-88-3; cc_chebi_agreed_name='(4-Chlorophenoxy)acetic acid'; object_uuid=fo-8f05438d654783e5
262,703 consensus_match altLabel [{"@value":"(4-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"(p-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… cas=122-88-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-8f05438d654783e5
262,705 consensus_match altLabel [{"@value":"(p-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"(p-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… group_key=4-cpa||dimension=Environmental > media=Air > indoor=Unknown; cas=122-88-3; added Common Chemistry CAS names as altLabel: 2-(4-Chlorophenoxy)acetic acid, 2-(<em>p</em>-Chlorophenoxy)acetic acid, <em>p</em>-CPA, Acetic acid, (4-chlorophenoxy)-, Acetic acid, (<em>p</em>-chlorophenoxy)-, Acetic acid, 2-(4-chlorophenoxy)-, BI 12, HP 55, NSC 8769, NSC 9213, P 10, PCPA, Tomatone, Tomatotone; object_uuid=fo-8f05438d654783e5
262,706 consensus_match cas_match_labels {"122-88-3":"exactMatch"} group_key=4-cpa||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'122-88-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8f05438d654783e5: {'122-88-3': 'exactMatch'}
273,866 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(4-Chlorophenoxy)acetic acid'
280,256 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… rdkit_post_consensus from 'O=C(O)COc1ccc(Cl)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,288 strip_catalogue_altlabels altLabel [{"@value":"(p-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… [{"@value":"(p-chlorophenoxy)acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… Removed 5 catalogue altLabel value(s): 'BI 12' (grade code), 'HP 55' (grade code), 'NSC 8769' (registry code), 'NSC 9213' (registry code), 'P 10' (grade code)
349,061 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/914e2e5c-537f-… associations resolved on the elementary layer
388,156 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7ClO3"]… typed the way the ontology types it
394,768 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,769 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/9602 prefLabel ef:agent/bootstrap_labels ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v0 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v1
ef:activity/change/20260820T0738569779880000/9603 name ef:agent/bootstrap_labels ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v1 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v2
ef:activity/change/20260820T0738569779880000/9604 synonyms ef:agent/bootstrap_labels ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v2 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v3
ef:activity/change/20260820T0738569779880000/136090 context ef:agent/default_context_mapping ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v3 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v4
ef:activity/change/20260820T0738569779880000/136091 context_iri ef:agent/default_context_mapping ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v4 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v5
ef:activity/change/20260820T0738569779880000/213834 unit_iri ef:agent/unit_normalization ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v5 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v6
ef:activity/change/20260820T0738569779880000/228604 properties ef:agent/enrich_references ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v6 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v7
ef:activity/change/20260820T0738569779880000/228605 skos_definition ef:agent/enrich_references ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v7 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v8
ef:activity/change/20260820T0738569779880000/228606 references ef:agent/enrich_references ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v8 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v9
ef:activity/change/20260820T0738569779880000/248731 properties ef:agent/rdkit_pre_consensus ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v9 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v10
ef:activity/change/20260820T0738569779880000/254558 altLabel ef:agent/chebi_altlabels ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v10 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v11
ef:activity/change/20260820T0738569779880000/262702 prefLabel ef:agent/consensus_match ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v11 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v12
ef:activity/change/20260820T0738569779880000/262703 altLabel ef:agent/consensus_match ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v12 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v13
ef:activity/change/20260820T0738569779880000/262705 altLabel ef:agent/consensus_match ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v13 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v14
ef:activity/change/20260820T0738569779880000/262706 cas_match_labels ef:agent/consensus_match ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v14 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v15
ef:activity/change/20260820T0738569779880000/273866 properties ef:agent/opsin_iupac ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v15 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v16
ef:activity/change/20260820T0738569779880000/280256 properties ef:agent/rdkit_post_consensus ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v16 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v17
ef:activity/change/20260820T0738569779880000/289288 altLabel ef:agent/strip_catalogue_altlabels ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v17 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v18
ef:activity/change/20260820T0738569779880000/349061 concept_associations ef:agent/carry_associations_onto_flows ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v18 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v19
ef:activity/change/20260820T0738569779880000/388156 properties ef:agent/normalise_property_values ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v19 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v20
ef:activity/change/20260820T0738569779880000/394768 types ef:agent/link_flows_to_their_substance ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v20 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v21
ef:activity/change/20260820T0738569779880000/394769 roles ef:agent/link_flows_to_their_substance ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v21 ef:flow/914e2e5c-537f-497f-81fc-eacd7df95da3/v22

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