Chenodeoxycholic Acid
Everything that changed this flow. Back to the flow
97171b11-f6ab-49a7-a71a-2c911449a3b7
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 2 | chebi_altlabels, consensus_match | group_key=chenodeoxycholicacid||dimension=Environmental > media=Water > water_body=Surface water; cas=474-25-9; added Common Chemistry CAS names as altLabel: (+)-Chenodeoxycholic acid, (3α,5β,7α)-3,7-Dihydroxycholan-24-oic acid, 17β-(1-Methyl-3-carboxypropyl)etiocholane-3α,7α-diol, 3α,7α-Dihydroxy-5β-cholan-24-oic acid, 3α,7α-Dihydroxy-5β-cholanic acid, 3α,7α-Dihydroxy-5β-cholanoic acid, 3α,7α-Dihydroxycholanic acid, 5β-Cholan-24-oic acid, 3α,7α-dihydroxy-, 5β-Cholanic acid, 3α,7α-dihydroxy-, 7α-Hydroxylithocholic acid, Anthropododesoxycholic acid, CDC, Chendol, Chenocedon, Chenocol, Chenodesoxycholic acid, Chenodex, Chenofalk, Chenossil, Cholan-24-oic acid, 3,7-dihydroxy-, (3α,5β,7α)-, Cholanorm, Fluibil, Hekbilin, Kebilis, MeSH ID: D002635, Ulmenide; object_uuid=fo-ea400cb59d5e8900 |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=chenodeoxycholicacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'474-25-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ea400cb59d5e8900: {'474-25-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['474-25-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16755']; candidate_pubchem_cids=[5645, 10133, 5702181, 6419977, 7092943, 9548590, 11516715, 12306691, 21252245, 21989262, 42552731, 44135443, 44754955, 76844686, 122706929, 134694228, 137323433, 145714624, 176541418]; selected_pubchem_cids=[10133]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,441 | bootstrap_labels | prefLabel | — | [{"@value":"chenodeoxycholic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Bootstrapped prefLabel from legacy name field |
| 1,442 | bootstrap_labels | name | chenodeoxycholic acid | — | Purged legacy name field to enforce prefLabel usage |
| 1,443 | bootstrap_labels | synonyms | ["organic","chenodeoxycholicacid","chenodeoxycholicacidothernames3î±,7î±-dihydroxycholanicacid"] | [] | Removed legacy synonyms field in favor of structured labels |
| 139,538 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 139,539 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 213,816 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,420 | normalize_name_case | prefLabel | [{"@value":"chenodeoxycholic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | [{"@value":"Chenodeoxycholic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 228,561 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 228,562 | enrich_references | skos_definition | — | [{"@value":"A dihydroxy-5β-cholanic acid that is (5β)-cholan-24-oic acid substituted by hydroxy groups at positions 3 a… | Merged ChEBI/PubChem definitions into skos:definition |
| 228,563 | enrich_references | references | [] | [{"@id":"drugcentral:4361","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['474-25-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16755']; candidate_pubchem_cids=[5645, 10133, 5702181, 6419977, 7092943, 9548590, 11516715, 12306691, 21252245, 21989262, 42552731, 44135443, 44754955, 76844686, 122706929, 134694228, 137323433, 145714624, 176541418]; selected_pubchem_cids=[10133]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,713 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | rdkit_pre_consensus from 'CC(CCC(=O)O)C1CCC2C1(CCC3C2C(CC4C3(CCC(C4)O)C)O)C'; added: inchi2d_string |
| 254,545 | chebi_altlabels | altLabel | [] | [{"@value":"3alpha,7alpha-Dihydroxy-5beta-cholanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… | Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 264,993 | consensus_match | altLabel | [{"@value":"3alpha,7alpha-Dihydroxy-5beta-cholanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… | [{"@value":"3alpha,7alpha-Dihydroxy-5beta-cholanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… | group_key=chenodeoxycholicacid||dimension=Environmental > media=Water > water_body=Surface water; cas=474-25-9; added Common Chemistry CAS names as altLabel: (+)-Chenodeoxycholic acid, (3α,5β,7α)-3,7-Dihydroxycholan-24-oic acid, 17β-(1-Methyl-3-carboxypropyl)etiocholane-3α,7α-diol, 3α,7α-Dihydroxy-5β-cholan-24-oic acid, 3α,7α-Dihydroxy-5β-cholanic acid, 3α,7α-Dihydroxy-5β-cholanoic acid, 3α,7α-Dihydroxycholanic acid, 5β-Cholan-24-oic acid, 3α,7α-dihydroxy-, 5β-Cholanic acid, 3α,7α-dihydroxy-, 7α-Hydroxylithocholic acid, Anthropododesoxycholic acid, CDC, Chendol, Chenocedon, Chenocol, Chenodesoxycholic acid, Chenodex, Chenofalk, Chenossil, Cholan-24-oic acid, 3,7-dihydroxy-, (3α,5β,7α)-, Cholanorm, Fluibil, Hekbilin, Kebilis, MeSH ID: D002635, Ulmenide; object_uuid=fo-ea400cb59d5e8900 |
| 264,994 | consensus_match | cas_match_labels | — | {"474-25-9":"exactMatch"} | group_key=chenodeoxycholicacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'474-25-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ea400cb59d5e8900: {'474-25-9': 'exactMatch'} |
| 273,837 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3alpha,7alpha-Dihydroxy-5beta-cholanic acid' |
| 280,225 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | rdkit_post_consensus from 'C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 350,770 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/97171b11-f6ab-… | associations resolved on the elementary layer |
| 388,123 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | typed the way the ontology types it |
| 394,731 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 394,732 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H40O4"]… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/1441 | prefLabel | ef:agent/bootstrap_labels | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v0 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v1 |
| ef:activity/change/20260822T0600486828500000/1442 | name | ef:agent/bootstrap_labels | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v1 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v2 |
| ef:activity/change/20260822T0600486828500000/1443 | synonyms | ef:agent/bootstrap_labels | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v2 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v3 |
| ef:activity/change/20260822T0600486828500000/139538 | context | ef:agent/default_context_mapping | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v3 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v4 |
| ef:activity/change/20260822T0600486828500000/139539 | context_iri | ef:agent/default_context_mapping | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v4 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v5 |
| ef:activity/change/20260822T0600486828500000/213816 | unit_iri | ef:agent/unit_normalization | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v5 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v6 |
| ef:activity/change/20260822T0600486828500000/221420 | prefLabel | ef:agent/normalize_name_case | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v6 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v7 |
| ef:activity/change/20260822T0600486828500000/228561 | properties | ef:agent/enrich_references | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v7 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v8 |
| ef:activity/change/20260822T0600486828500000/228562 | skos_definition | ef:agent/enrich_references | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v8 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v9 |
| ef:activity/change/20260822T0600486828500000/228563 | references | ef:agent/enrich_references | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v9 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v10 |
| ef:activity/change/20260822T0600486828500000/248713 | properties | ef:agent/rdkit_pre_consensus | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v10 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v11 |
| ef:activity/change/20260822T0600486828500000/254545 | altLabel | ef:agent/chebi_altlabels | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v11 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v12 |
| ef:activity/change/20260822T0600486828500000/264993 | altLabel | ef:agent/consensus_match | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v12 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v13 |
| ef:activity/change/20260822T0600486828500000/264994 | cas_match_labels | ef:agent/consensus_match | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v13 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v14 |
| ef:activity/change/20260822T0600486828500000/273837 | properties | ef:agent/opsin_iupac | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v14 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v15 |
| ef:activity/change/20260822T0600486828500000/280225 | properties | ef:agent/rdkit_post_consensus | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v15 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v16 |
| ef:activity/change/20260822T0600486828500000/350770 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v16 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v17 |
| ef:activity/change/20260822T0600486828500000/388123 | properties | ef:agent/normalise_property_values | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v17 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v18 |
| ef:activity/change/20260822T0600486828500000/394731 | types | ef:agent/link_flows_to_their_substance | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v18 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v19 |
| ef:activity/change/20260822T0600486828500000/394732 | properties | ef:agent/link_flows_to_their_substance | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v19 | ef:flow/97171b11-f6ab-49a7-a71a-2c911449a3b7/v20 |