Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=disamariumtrioxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['ec_inventory', 'pubchem']; cas_sources={'12060-58-1': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-afe917c2e1d99f86: {'12060-58-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['12060-58-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[159425, 4247557]; selected_pubchem_cids=[159425, 4247557]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
21,142 bootstrap_labels prefLabel [{"@value":"disamarium trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Bootstrapped prefLabel from legacy name field
21,143 bootstrap_labels name disamarium trioxide Purged legacy name field to enforce prefLabel usage
21,144 bootstrap_labels synonyms ["inorganic","samarium(iii)oxide"] [] Removed legacy synonyms field in favor of structured labels
139,824 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
139,825 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
220,143 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,880 normalize_name_case prefLabel [{"@value":"disamarium trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… [{"@value":"Disamarium Trioxide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
246,589 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=2)
246,590 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
246,591 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.031.845","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['12060-58-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[159425, 4247557]; selected_pubchem_cids=[159425, 4247557]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,923 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… rdkit_pre_consensus from 'O=[Sm]O[Sm]=O'; added: molecular_mass, monoisotopic_mass
266,318 consensus_match altLabel [] [{"@value":"Samaria","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… group_key=disamariumtrioxide||dimension=Environmental > media=Air > strata=Unknown; cas=12060-58-1; added Common Chemistry CAS names as altLabel: Samaria, Samarium oxide, Samarium oxide (Sm<sub>2</sub>O<sub>3</sub>), Samarium oxide (SmO<sub>1.5</sub>), Samarium sesquioxide, Samarium trioxide, Samarium(3+) oxide, Samarium(III) oxide; object_uuid=fo-afe917c2e1d99f86
266,319 consensus_match cas_match_labels {"12060-58-1":"exactMatch"} group_key=disamariumtrioxide||dimension=Environmental > media=Air > strata=Unknown; group_sources=['ec_inventory', 'pubchem']; cas_sources={'12060-58-1': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-afe917c2e1d99f86: {'12060-58-1': 'exactMatch'}
279,108 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Disamarium Trioxide'
285,959 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… rdkit_post_consensus from '[O-2].[O-2].[O-2].[Sm+3].[Sm+3]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,197 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["O3Sm2"],"a… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
293,111 dedupe_altlabels altLabel [{"@value":"Samaria","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… [{"@value":"Samaria","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consens… Deduplicated altLabel values and removed entries matching prefLabel
350,913 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/97943017-af1b-… associations resolved on the elementary layer
402,505 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/21142 prefLabel ef:agent/bootstrap_labels ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v0 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v1
ef:activity/change/20260822T0600486828500000/21143 name ef:agent/bootstrap_labels ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v1 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v2
ef:activity/change/20260822T0600486828500000/21144 synonyms ef:agent/bootstrap_labels ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v2 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v3
ef:activity/change/20260822T0600486828500000/139824 context ef:agent/default_context_mapping ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v3 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v4
ef:activity/change/20260822T0600486828500000/139825 context_iri ef:agent/default_context_mapping ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v4 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v5
ef:activity/change/20260822T0600486828500000/220143 unit_iri ef:agent/unit_normalization ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v5 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v6
ef:activity/change/20260822T0600486828500000/225880 prefLabel ef:agent/normalize_name_case ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v6 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v7
ef:activity/change/20260822T0600486828500000/246589 properties ef:agent/enrich_references ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v7 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v8
ef:activity/change/20260822T0600486828500000/246590 skos_definition ef:agent/enrich_references ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v8 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v9
ef:activity/change/20260822T0600486828500000/246591 references ef:agent/enrich_references ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v9 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v10
ef:activity/change/20260822T0600486828500000/253923 properties ef:agent/rdkit_pre_consensus ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v10 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v11
ef:activity/change/20260822T0600486828500000/266318 altLabel ef:agent/consensus_match ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v11 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v12
ef:activity/change/20260822T0600486828500000/266319 cas_match_labels ef:agent/consensus_match ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v12 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v13
ef:activity/change/20260822T0600486828500000/279108 properties ef:agent/opsin_iupac ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v13 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v14
ef:activity/change/20260822T0600486828500000/285959 properties ef:agent/rdkit_post_consensus ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v14 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v15
ef:activity/change/20260822T0600486828500000/287197 properties ef:agent/withhold_ambiguous_mass ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v15 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v16
ef:activity/change/20260822T0600486828500000/293111 altLabel ef:agent/dedupe_altlabels ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v16 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v17
ef:activity/change/20260822T0600486828500000/350913 concept_associations ef:agent/carry_associations_onto_flows ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v17 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v18
ef:activity/change/20260822T0600486828500000/402505 types ef:agent/link_flows_to_their_substance ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v18 ef:flow/97943017-af1b-4710-959a-734c3fd4114f/v19

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