Chlortetracycline
Everything that changed this flow. Back to the flow
98fd2a33-7148-4827-8e3f-6f07b836c4ed
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'Aureomycin 100G' (trade name) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=chlortetracycline||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57-62-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e22166fe69166151: {'57-62-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['57-62-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27644']; candidate_pubchem_cids=[45356946, 54675777, 54676345, 54677440, 54686894, 54693024, 54737570, 146156214]; selected_pubchem_cids=[54675777]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 13,472 | bootstrap_labels | prefLabel | — | [{"@value":"chlortetracycline","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | Bootstrapped prefLabel from legacy name field |
| 13,473 | bootstrap_labels | name | chlortetracycline | — | Purged legacy name field to enforce prefLabel usage |
| 13,474 | bootstrap_labels | synonyms | ["(2Z,4S,4aS,6S,12aS)-2-[amino(hydroxy)methylidene]-7-chloro-4-(dimethylamino)-6,10,11,12a-tetrahydroxy-6-methyl-4,4a,5… | [] | Removed legacy synonyms field in favor of structured labels |
| 140,660 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 140,661 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 217,790 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,214 | normalize_name_case | prefLabel | [{"@value":"chlortetracycline","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | [{"@value":"Chlortetracycline","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 239,946 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 239,947 | enrich_references | skos_definition | — | [{"@value":"A member of the class of tetracyclines with formula C22H23ClN2O8 isolated from Streptomyces aureofaciens.",… | Merged ChEBI/PubChem definitions into skos:definition |
| 239,948 | enrich_references | references | [] | [{"@id":"drugcentral:624","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… | Added references with provenance; cas_numbers=['57-62-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27644']; candidate_pubchem_cids=[45356946, 54675777, 54676345, 54677440, 54686894, 54693024, 54737570, 146156214]; selected_pubchem_cids=[54675777]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,989 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | rdkit_pre_consensus from 'CC1(C2CC3C(C(=O)C(=C(C3(C(=O)C2=C(C4=C(C=CC(=C41)Cl)O)O)O)O)C(=O)N)N(C)C)O'; added: inchi2d_string, monoisotopic_mass |
| 256,214 | chebi_altlabels | altLabel | [] | [{"@value":"(4S,4aS,5aS,6S,12aS)-7-chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,… | Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,133 | consensus_match | altLabel | [{"@value":"(4S,4aS,5aS,6S,12aS)-7-chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,… | [{"@value":"(4S,4aS,5aS,6S,12aS)-7-chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,… | group_key=chlortetracycline||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=57-62-5; added Common Chemistry CAS names as altLabel: (4<em>S</em>,4a<em>S</em>,5a<em>S</em>,6<em>S</em>,12a<em>S</em>)-7-Chloro-4-(dimethylamino)-1,4,4a,5,5a,6,11,12a-octahydro-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-2-naphthacenecarboxamide, 2-Naphthacenecarboxamide, 7-chloro-4-(dimethylamino)-1,4,4a,5,5a,6,11,12a-octahydro-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-, 2-Naphthacenecarboxamide, 7-chloro-4-(dimethylamino)-1,4,4a,5,5a,6,11,12a-octahydro-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-, (4<em>S</em>,4a<em>S</em>,5a<em>S</em>,6<em>S</em>,12a<em>S</em>)-, 2-Naphthacenecarboxamide, 7-chloro-4-(dimethylamino)-1,4,4a,5,5a,6,11,12a-octahydro-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-, [4<em>S</em>-(4α,4aα,5aα,6β,12aα)]-, 4-(Dimethylamino)-7-chloro-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-4,5,6,12a,4a,5a-hexahydronaphthacene-2-carboxamide, 7-Chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydro-2-naphthacenecarboxamide, 7-Chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, 7-Chloro-4-dimethylamino-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-4,4a,5,5a-tetrahydrotetracene-2-carboxamide, 7-Chlortetracycline, A-Mycin, Acronize, Acronize PD, Aureocarmyl, Aureociclin, Aureocina, Aureomicina, Aureomycin, Aureomycin 100G, Aureomykoin, Aurofac, Aurofac 10, Biomycin, Biomycin a, CTC, CTC (antibiotic), Centraureo, Chloratet 50, Chlorocyclinum, Chlortetracyclin, Chrusomykine, Chrysomykine, Duomycin, Flamycin, JinMeiSu, MeSH ID: D002751, Orospray, Tri-chlortetracycline, Uromycin; object_uuid=fo-e22166fe69166151 |
| 265,134 | consensus_match | cas_match_labels | — | {"57-62-5":"exactMatch"} | group_key=chlortetracycline||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'57-62-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e22166fe69166151: {'57-62-5': 'exactMatch'} |
| 283,848 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | rdkit_post_consensus from 'CC1(C2CC3C(C(=O)C(=C(C3(C(=O)C2=C(C4=C(C=CC(=C41)Cl)O)O)O)O)C(=O)N)N(C)C)O'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,020 | withhold_ambiguous_mass | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it |
| 290,022 | strip_catalogue_altlabels | altLabel | [{"@value":"(4S,4aS,5aS,6S,12aS)-7-chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,… | [{"@value":"(4S,4aS,5aS,6S,12aS)-7-chloro-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,… | Removed 1 catalogue altLabel value(s): 'Aureomycin 100G' (trade name) |
| 351,331 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/98fd2a33-7148-… | associations resolved on the elementary layer |
| 391,535 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | typed the way the ontology types it |
| 399,614 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 399,615 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C22H23ClN2… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/13472 | prefLabel | ef:agent/bootstrap_labels | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v0 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v1 |
| ef:activity/change/20260821T1554374006150000/13473 | name | ef:agent/bootstrap_labels | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v1 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v2 |
| ef:activity/change/20260821T1554374006150000/13474 | synonyms | ef:agent/bootstrap_labels | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v2 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v3 |
| ef:activity/change/20260821T1554374006150000/140660 | context | ef:agent/default_context_mapping | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v3 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v4 |
| ef:activity/change/20260821T1554374006150000/140661 | context_iri | ef:agent/default_context_mapping | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v4 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v5 |
| ef:activity/change/20260821T1554374006150000/217790 | unit_iri | ef:agent/unit_normalization | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v5 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v6 |
| ef:activity/change/20260821T1554374006150000/224214 | prefLabel | ef:agent/normalize_name_case | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v6 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v7 |
| ef:activity/change/20260821T1554374006150000/239946 | properties | ef:agent/enrich_references | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v7 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v8 |
| ef:activity/change/20260821T1554374006150000/239947 | skos_definition | ef:agent/enrich_references | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v8 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v9 |
| ef:activity/change/20260821T1554374006150000/239948 | references | ef:agent/enrich_references | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v9 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v10 |
| ef:activity/change/20260821T1554374006150000/251989 | properties | ef:agent/rdkit_pre_consensus | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v10 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v11 |
| ef:activity/change/20260821T1554374006150000/256214 | altLabel | ef:agent/chebi_altlabels | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v11 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v12 |
| ef:activity/change/20260821T1554374006150000/265133 | altLabel | ef:agent/consensus_match | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v12 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v13 |
| ef:activity/change/20260821T1554374006150000/265134 | cas_match_labels | ef:agent/consensus_match | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v13 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v14 |
| ef:activity/change/20260821T1554374006150000/283848 | properties | ef:agent/rdkit_post_consensus | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v14 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v15 |
| ef:activity/change/20260821T1554374006150000/287020 | properties | ef:agent/withhold_ambiguous_mass | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v15 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v16 |
| ef:activity/change/20260821T1554374006150000/290022 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v16 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v17 |
| ef:activity/change/20260821T1554374006150000/351331 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v17 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v18 |
| ef:activity/change/20260821T1554374006150000/391535 | properties | ef:agent/normalise_property_values | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v18 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v19 |
| ef:activity/change/20260821T1554374006150000/399614 | types | ef:agent/link_flows_to_their_substance | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v19 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v20 |
| ef:activity/change/20260821T1554374006150000/399615 | properties | ef:agent/link_flows_to_their_substance | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v20 | ef:flow/98fd2a33-7148-4827-8e3f-6f07b836c4ed/v21 |