Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 60161' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=106-68-3; cc_chebi_agreed_name='3-Octanone'; object_uuid=fo-5dfd588d986a4c47
cas_match_labels 1 consensus_match group_key=octan-3-one||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-68-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5dfd588d986a4c47: {'106-68-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['106-68-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_80946']; candidate_pubchem_cids=[12280, 246728]; selected_pubchem_cids=[246728]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
13,034 bootstrap_labels prefLabel [{"@value":"octan-3-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
13,035 bootstrap_labels name octan-3-one Purged legacy name field to enforce prefLabel usage
24,517 bootstrap_labels synonyms ["octan-3-one","radiaeake","3-octanone","ethylamylketone","octan-3-0ne","octan-3-one(ethylamylketone)","'Ethyl isoamyl… [] Removed legacy synonyms field in favor of structured labels
143,900 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
143,901 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-aicrhe Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere
217,654 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,116 normalize_name_case prefLabel [{"@value":"octan-3-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Octan-3-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,553 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
239,554 enrich_references skos_definition [{"@value":"A dialkyl ketone that is octane in which the two methylene protons at position 3 have been replaced by an o… Merged ChEBI/PubChem definitions into skos:definition
239,555 enrich_references references [] [{"@id":"agr:IND20372171","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['106-68-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_80946']; candidate_pubchem_cids=[12280, 246728]; selected_pubchem_cids=[246728]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,880 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… rdkit_pre_consensus from 'CCCCCC(=O)CC'; added: monoisotopic_mass
256,174 chebi_altlabels altLabel [] [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,156 consensus_match prefLabel [{"@value":"Octan-3-one","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"3-Octanone","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"cons… cas=106-68-3; cc_chebi_agreed_name='3-Octanone'; object_uuid=fo-5dfd588d986a4c47
270,157 consensus_match altLabel [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… cas=106-68-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-5dfd588d986a4c47
270,158 consensus_match altLabel [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=octan-3-one||dimension=Environmental > media=Water > water_body=Unknown; cas=106-68-3; added Common Chemistry CAS names as altLabel: 3-Octanal, <em>n</em>-Octanone-3, NSC 60161; object_uuid=fo-5dfd588d986a4c47
270,159 consensus_match cas_match_labels {"106-68-3":"exactMatch"} group_key=octan-3-one||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-68-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5dfd588d986a4c47: {'106-68-3': 'exactMatch'}
277,087 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-Octanone'
283,742 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… rdkit_post_consensus from 'CCCCCC(=O)CC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,953 strip_catalogue_altlabels altLabel [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"3-Oxooctane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Removed 1 catalogue altLabel value(s): 'NSC 60161' (registry code)
352,972 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/9e41d041-914e-… associations resolved on the elementary layer
391,439 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O"],"… typed the way the ontology types it
399,463 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,464 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22583","rdfs:label":"antifeedant","http://www.w3.org/2004/02/skos/core#de… the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/13034 prefLabel ef:agent/bootstrap_labels ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v0 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v1
ef:activity/change/20260820T0738569779880000/13035 name ef:agent/bootstrap_labels ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v1 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v2
ef:activity/change/20260820T0738569779880000/24517 synonyms ef:agent/bootstrap_labels ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v2 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v3
ef:activity/change/20260820T0738569779880000/143900 context ef:agent/default_context_mapping ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v3 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v4
ef:activity/change/20260820T0738569779880000/143901 context_iri ef:agent/default_context_mapping ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v4 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v5
ef:activity/change/20260820T0738569779880000/217654 unit_iri ef:agent/unit_normalization ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v5 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v6
ef:activity/change/20260820T0738569779880000/224116 prefLabel ef:agent/normalize_name_case ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v6 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v7
ef:activity/change/20260820T0738569779880000/239553 properties ef:agent/enrich_references ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v7 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v8
ef:activity/change/20260820T0738569779880000/239554 skos_definition ef:agent/enrich_references ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v8 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v9
ef:activity/change/20260820T0738569779880000/239555 references ef:agent/enrich_references ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v9 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v10
ef:activity/change/20260820T0738569779880000/251880 properties ef:agent/rdkit_pre_consensus ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v10 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v11
ef:activity/change/20260820T0738569779880000/256174 altLabel ef:agent/chebi_altlabels ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v11 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v12
ef:activity/change/20260820T0738569779880000/270156 prefLabel ef:agent/consensus_match ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v12 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v13
ef:activity/change/20260820T0738569779880000/270157 altLabel ef:agent/consensus_match ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v13 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v14
ef:activity/change/20260820T0738569779880000/270158 altLabel ef:agent/consensus_match ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v14 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v15
ef:activity/change/20260820T0738569779880000/270159 cas_match_labels ef:agent/consensus_match ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v15 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v16
ef:activity/change/20260820T0738569779880000/277087 properties ef:agent/opsin_iupac ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v16 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v17
ef:activity/change/20260820T0738569779880000/283742 properties ef:agent/rdkit_post_consensus ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v17 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v18
ef:activity/change/20260820T0738569779880000/289953 altLabel ef:agent/strip_catalogue_altlabels ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v18 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v19
ef:activity/change/20260820T0738569779880000/352972 concept_associations ef:agent/carry_associations_onto_flows ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v19 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v20
ef:activity/change/20260820T0738569779880000/391439 properties ef:agent/normalise_property_values ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v20 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v21
ef:activity/change/20260820T0738569779880000/399463 types ef:agent/link_flows_to_their_substance ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v21 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v22
ef:activity/change/20260820T0738569779880000/399464 roles ef:agent/link_flows_to_their_substance ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v22 ef:flow/9e41d041-914e-4395-8564-ada97e458d41/v23

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