Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 5 catalogue altLabel value(s): 'A 19374' (grade code), 'C 2204' (grade code), 'NSC 117393' (registry code), 'NSC 25536' (registry code), 'NSC 4977' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=caprolactam||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'105-60-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-93c107845d9c319e: {'105-60-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['105-60-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28579']; candidate_pubchem_cids=[7768, 55300695, 86623804]; selected_pubchem_cids=[7768]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
7,080 bootstrap_labels prefLabel [{"@value":"caprolactam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
7,081 bootstrap_labels name caprolactam Purged legacy name field to enforce prefLabel usage
24,517 bootstrap_labels synonyms ["îµ-caprolactam","caprolactam","2h-azepin-2-one, hexahydro-","hexahydro-2h-azepin-2-one","caprolactum","µ-caprolactam"… [] Removed legacy synonyms field in favor of structured labels
144,042 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
144,043 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
215,703 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,719 normalize_name_case prefLabel [{"@value":"caprolactam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Caprolactam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,969 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,970 enrich_references skos_definition [{"@value":"A member of the class of caprolactams that is azepane substituted by an oxo group at position 2.","@languag… Merged ChEBI/PubChem definitions into skos:definition
233,971 enrich_references references [] [{"@id":"gmelin:101802","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['105-60-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28579']; candidate_pubchem_cids=[7768, 55300695, 86623804]; selected_pubchem_cids=[7768]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,275 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… rdkit_pre_consensus from 'C1CCC(=O)NCC1'; added: monoisotopic_mass
255,270 chebi_altlabels altLabel [] [{"@value":"2-ketohexamethyleneimine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,826 consensus_match altLabel [{"@value":"2-ketohexamethyleneimine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"2-ketohexamethyleneimine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=caprolactam||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=105-60-2; added Common Chemistry CAS names as altLabel: 1-Aza-2-cycloheptanone, 2-Azacycloheptanone, 2-Ketohexamethylenimine, 2-Oxoazepane, 2-Perhydroazepinone, 2<em>H</em>-Azepin-2-one, hexahydro-, 6-Aminohexanoic acid lactam, 6-Hexanelactam, A 19374, AP, AP (lactam), AP-Nylon, C 2204, Hexahydro-1<em>H</em>-azepin-2-one, Hexahydro-2-azepinone, Hexano-6-lactam, Hexanoic acid, 6-amino-, cyclic lactam, Hexanolactam, MeSH ID: D002209, NSC 117393, NSC 25536, NSC 4977, ε-Caprolactam, ω-Caprolactam; object_uuid=fo-93c107845d9c319e
264,827 consensus_match cas_match_labels {"105-60-2":"exactMatch"} group_key=caprolactam||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'105-60-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-93c107845d9c319e: {'105-60-2': 'exactMatch'}
275,420 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Caprolactam'
281,936 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… rdkit_post_consensus from 'O=C1CCCCCN1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,701 strip_catalogue_altlabels altLabel [{"@value":"2-ketohexamethyleneimine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"2-ketohexamethyleneimine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Removed 5 catalogue altLabel value(s): 'A 19374' (grade code), 'C 2204' (grade code), 'NSC 117393' (registry code), 'NSC 25536' (registry code), 'NSC 4977' (registry code)
353,023 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/9e8a04b7-b869-… associations resolved on the elementary layer
389,729 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H11NO"],… typed the way the ontology types it
397,005 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/7080 prefLabel ef:agent/bootstrap_labels ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v0 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v1
ef:activity/change/20260821T1554374006150000/7081 name ef:agent/bootstrap_labels ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v1 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v2
ef:activity/change/20260821T1554374006150000/24517 synonyms ef:agent/bootstrap_labels ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v2 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v3
ef:activity/change/20260821T1554374006150000/144042 context ef:agent/default_context_mapping ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v3 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v4
ef:activity/change/20260821T1554374006150000/144043 context_iri ef:agent/default_context_mapping ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v4 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v5
ef:activity/change/20260821T1554374006150000/215703 unit_iri ef:agent/unit_normalization ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v5 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v6
ef:activity/change/20260821T1554374006150000/222719 prefLabel ef:agent/normalize_name_case ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v6 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v7
ef:activity/change/20260821T1554374006150000/233969 properties ef:agent/enrich_references ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v7 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v8
ef:activity/change/20260821T1554374006150000/233970 skos_definition ef:agent/enrich_references ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v8 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v9
ef:activity/change/20260821T1554374006150000/233971 references ef:agent/enrich_references ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v9 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v10
ef:activity/change/20260821T1554374006150000/250275 properties ef:agent/rdkit_pre_consensus ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v10 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v11
ef:activity/change/20260821T1554374006150000/255270 altLabel ef:agent/chebi_altlabels ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v11 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v12
ef:activity/change/20260821T1554374006150000/264826 altLabel ef:agent/consensus_match ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v12 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v13
ef:activity/change/20260821T1554374006150000/264827 cas_match_labels ef:agent/consensus_match ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v13 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v14
ef:activity/change/20260821T1554374006150000/275420 properties ef:agent/opsin_iupac ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v14 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v15
ef:activity/change/20260821T1554374006150000/281936 properties ef:agent/rdkit_post_consensus ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v15 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v16
ef:activity/change/20260821T1554374006150000/288701 altLabel ef:agent/strip_catalogue_altlabels ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v16 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v17
ef:activity/change/20260821T1554374006150000/353023 concept_associations ef:agent/carry_associations_onto_flows ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v17 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v18
ef:activity/change/20260821T1554374006150000/389729 properties ef:agent/normalise_property_values ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v18 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v19
ef:activity/change/20260821T1554374006150000/397005 types ef:agent/link_flows_to_their_substance ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v19 ef:flow/9e8a04b7-b869-41bd-82fb-f5bf542867f3/v20

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