Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'C.I. 77450' (registry code), 'NSC 47694' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=copper(ii)sulphide||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'1317-40-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-f8ffe677f9d3207b: {'1317-40-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1317-40-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_51110']; candidate_pubchem_cids=[14831, 165914, 57419688]; selected_pubchem_cids=[165914]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
19,177 bootstrap_labels prefLabel [{"@value":"copper(ii) sulphide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Bootstrapped prefLabel from legacy name field
19,178 bootstrap_labels name copper(ii) sulphide Purged legacy name field to enforce prefLabel usage
19,179 bootstrap_labels synonyms ["inorganic","coppersulphide"] [] Removed legacy synonyms field in favor of structured labels
145,094 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
145,095 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
219,589 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,456 normalize_name_case prefLabel [{"@value":"copper(ii) sulphide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… [{"@value":"Copper(ii) Sulphide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
245,028 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
245,029 enrich_references skos_definition [{"@value":"A copper sulfide in which the metal is in the +2 oxidation state.","@language":"en","provenance":{"prov:was… Merged ChEBI/PubChem definitions into skos:definition
245,030 enrich_references references [] [{"@id":"gmelin:13690","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['1317-40-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_51110']; candidate_pubchem_cids=[14831, 165914, 57419688]; selected_pubchem_cids=[165914]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,457 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… rdkit_pre_consensus from '[Cu+2].[S-2]'; added: monoisotopic_mass
256,878 chebi_altlabels altLabel [] [{"@value":"CuS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,323 consensus_match altLabel [{"@value":"CuS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"CuS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=copper(ii)sulphide||dimension=Environmental > media=Ground > geography=Unknown; cas=1317-40-4; added Common Chemistry CAS names as altLabel: C.I. 77450, C.I. Pigment Blue 34, Copper Blue, Copper sulfide (Cu<sub>0.5</sub>S<sub>0.5</sub>), Copper sulfide (CuS), Horace Vernet's Blue, NSC 47694, Oil Blue; object_uuid=fo-f8ffe677f9d3207b
265,324 consensus_match cas_match_labels {"1317-40-4":"exactMatch"} group_key=copper(ii)sulphide||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'1317-40-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-f8ffe677f9d3207b: {'1317-40-4': 'exactMatch'}
278,673 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Copper(ii) Sulphide'
285,453 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… rdkit_post_consensus from '[S]=[Cu]'; added: inchi2d_key_string; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
287,144 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
291,112 strip_catalogue_altlabels altLabel [{"@value":"CuS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"CuS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Removed 2 catalogue altLabel value(s): 'C.I. 77450' (registry code), 'NSC 47694' (registry code)
353,549 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a04bffd5-9575-… associations resolved on the elementary layer
393,040 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cu.S","CuS… typed the way the ontology types it
401,802 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/19177 prefLabel ef:agent/bootstrap_labels ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v0 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v1
ef:activity/change/20260822T0600486828500000/19178 name ef:agent/bootstrap_labels ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v1 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v2
ef:activity/change/20260822T0600486828500000/19179 synonyms ef:agent/bootstrap_labels ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v2 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v3
ef:activity/change/20260822T0600486828500000/145094 context ef:agent/default_context_mapping ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v3 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v4
ef:activity/change/20260822T0600486828500000/145095 context_iri ef:agent/default_context_mapping ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v4 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v5
ef:activity/change/20260822T0600486828500000/219589 unit_iri ef:agent/unit_normalization ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v5 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v6
ef:activity/change/20260822T0600486828500000/225456 prefLabel ef:agent/normalize_name_case ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v6 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v7
ef:activity/change/20260822T0600486828500000/245028 properties ef:agent/enrich_references ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v7 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v8
ef:activity/change/20260822T0600486828500000/245029 skos_definition ef:agent/enrich_references ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v8 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v9
ef:activity/change/20260822T0600486828500000/245030 references ef:agent/enrich_references ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v9 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v10
ef:activity/change/20260822T0600486828500000/253457 properties ef:agent/rdkit_pre_consensus ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v10 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v11
ef:activity/change/20260822T0600486828500000/256878 altLabel ef:agent/chebi_altlabels ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v11 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v12
ef:activity/change/20260822T0600486828500000/265323 altLabel ef:agent/consensus_match ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v12 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v13
ef:activity/change/20260822T0600486828500000/265324 cas_match_labels ef:agent/consensus_match ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v13 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v14
ef:activity/change/20260822T0600486828500000/278673 properties ef:agent/opsin_iupac ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v14 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v15
ef:activity/change/20260822T0600486828500000/285453 properties ef:agent/rdkit_post_consensus ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v15 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v16
ef:activity/change/20260822T0600486828500000/287144 properties ef:agent/withhold_ambiguous_mass ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v16 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v17
ef:activity/change/20260822T0600486828500000/291112 altLabel ef:agent/strip_catalogue_altlabels ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v17 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v18
ef:activity/change/20260822T0600486828500000/353549 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v18 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v19
ef:activity/change/20260822T0600486828500000/393040 properties ef:agent/normalise_property_values ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v19 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v20
ef:activity/change/20260822T0600486828500000/401802 types ef:agent/link_flows_to_their_substance ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v20 ef:flow/a04bffd5-9575-413b-90b3-4292b0a7a2d4/v21

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.