Chloramphenicol
Everything that changed this flow. Back to the flow
a4496206-28c2-4048-88f8-1ac44cec97ea
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'I 337A' (grade code), 'NSC 3069' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=chloramphenicol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56-75-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-32ec0be06f0851c8: {'56-75-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['56-75-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17698']; candidate_pubchem_cids=[298, 5959, 92099, 146033, 146034, 16399516]; selected_pubchem_cids=[5959]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 16,525 | bootstrap_labels | prefLabel | — | [{"@value":"chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Bootstrapped prefLabel from legacy name field |
| 16,526 | bootstrap_labels | name | chloramphenicol | — | Purged legacy name field to enforce prefLabel usage |
| 18,322 | bootstrap_labels | synonyms | ["2,2-Dichloro-N-(2-hydroxy-1-(hydroxymethyl)-2-(4-(hydroxy(oxido)amino)phenyl)ethyl)acetamide, (1R, 2","2,2-Dichloro-N… | [] | Removed legacy synonyms field in favor of structured labels |
| 147,616 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 147,617 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 218,763 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,883 | normalize_name_case | prefLabel | [{"@value":"chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | [{"@value":"Chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 242,718 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 242,719 | enrich_references | skos_definition | — | [{"@value":"An organochlorine compound that is dichloro-substituted acetamide containing a nitrobenzene ring, an amide… | Merged ChEBI/PubChem definitions into skos:definition |
| 242,720 | enrich_references | references | [] | [{"@id":"beilstein:2225532","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['56-75-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17698']; candidate_pubchem_cids=[298, 5959, 92099, 146033, 146034, 16399516]; selected_pubchem_cids=[5959]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,795 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | rdkit_pre_consensus from 'C1=CC(=CC=C1C(C(CO)NC(=O)C(Cl)Cl)O)[N+](=O)[O-]'; added: inchi2d_string, monoisotopic_mass |
| 256,565 | chebi_altlabels | altLabel | [] | [{"@value":"(-)-chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | Added 21 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,007 | consensus_match | altLabel | [{"@value":"(-)-chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | [{"@value":"(-)-chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | group_key=chloramphenicol||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=56-75-7; added Common Chemistry CAS names as altLabel: 5: PN: CN114214436 PAGE: 3 claimed sequence, <span class="text-smallcaps">D</span>-(-)-<em>threo</em>-1-(4-Nitrophenyl)-2-dichloroacetamido-1,3-propanediol, <span class="text-smallcaps">D</span>-(-)-<em>threo</em>-1-<em>p</em>-Nitrophenyl-2-dichloracetamido-1,3-propanediol, <span class="text-smallcaps">D</span>-(-)-<em>threo</em>-2-Dichloroacetamido-1-<em>p</em>-nitrophenyl-1,3-propanediol, <span class="text-smallcaps">D</span>-(-)-<em>threo</em>-Chloramphenicol, <span class="text-smallcaps">D</span>-(-)-Chloramphenicol, <span class="text-smallcaps">D</span>-<em>threo</em>-(1<em>R</em>,2<em>R</em>)-1-<em>p</em>-Nitrophenyl-2-dichloroacetamido-1,3-propanediol, <span class="text-smallcaps">D</span>-<em>threo</em>-<em>N</em>-Dichloroacetyl-1-<em>p</em>-nitrophenyl-2-amino-1,3-propanediol, <span class="text-smallcaps">D</span>-<em>threo</em>-Chloramphenicol, <span class="text-smallcaps">D</span>-Chloramphenicol, Acetamide, 2,2-dichloro-<em>N</em>-[(1<em>R</em>,2<em>R</em>)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]-, Acetamide, 2,2-dichloro-<em>N</em>-[2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]-, [<em>R</em>-(<em>R</em>*,<em>R</em>*)]-, Acetamide, 2,2-dichloro-<em>N</em>-[β-hydroxy-α-(hydroxymethyl)-<em>p</em>-nitrophenethyl]-, <span class="text-smallcaps">D</span>-<em>threo</em>-(-)-, Ak-Chlor, Alficetyn, Amphenicol, Amseclor, Anacetin, Aquamycetin, Austracol, Bradyoxetin, CAF, CAF (pharmaceutical), CAM, CAP, CPh, Catilan, Chemicetin, Chemicetina, Chlomycol, Chloramsaar, Chlorasol, Chlorcetin, Chloricol, Chlorocaps, Chlorocide, Chlorocidin C, Chlorocidin C tetran, Chlorocin, Chloronitrin, Chloroptic, Ciplamycetin, Cloramfen, Cloramficin, Cloramicol, Clorocyn, Cloromisan, Cylphenicol, Detreomycin, Embacetin, Enicol, Enteromycetin, Farmicetina, Gloveticol, Halcetin, I 337A, Intramycetin, Ismicetina, Juvamycetin, Kamaver, Kemicetine, Klorita, Klorocid S, Leukomyan, Leukomycin, Levocin, Levomitsetin, Levoplast, Levosin, Levovetin, Loromisin, Mastiphen, MeSH ID: D002701, Micloretin, Micoclorina, Microcetina, Mychel, Mychel-Vet, Mycinol, Myclocin, Mycochlorin, NSC 3069, Normimycin V, Novomycetin, Ocuphenicol, Opclor, Ophthochlor, Pantovernil, Paraxin, Quemicetina, Ronphenil, Septicol, Sintomicetin, Sintomicetina, Sintomicetine R, Sno Phenicol, Soluthor, Stanomycetin, Synthomycetin, Tevcocin, Tifomycine, Treomicetina, Unimycetin, Veticol, Viceton; object_uuid=fo-32ec0be06f0851c8 |
| 265,008 | consensus_match | cas_match_labels | — | {"56-75-7":"exactMatch"} | group_key=chloramphenicol||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56-75-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-32ec0be06f0851c8: {'56-75-7': 'exactMatch'} |
| 277,996 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,2-dichloro-N-[(1R,2R)-2-hydroxy-1-(hydroxymethyl)-2-(4-nitrophenyl)ethyl]acetamide' |
| 284,724 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | rdkit_post_consensus from 'O=C(N[C@H](CO)[C@H](O)c1ccc([N+](=O)[O-])cc1)C(Cl)Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,612 | strip_catalogue_altlabels | altLabel | [{"@value":"(-)-chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | [{"@value":"(-)-chloramphenicol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… | Removed 2 catalogue altLabel value(s): 'I 337A' (grade code), 'NSC 3069' (registry code) |
| 354,830 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a4496206-28c2-… | associations resolved on the elementary layer |
| 392,353 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | typed the way the ontology types it |
| 400,782 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 400,783 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H12Cl2N… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/16525 | prefLabel | ef:agent/bootstrap_labels | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v0 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v1 |
| ef:activity/change/20260822T0600486828500000/16526 | name | ef:agent/bootstrap_labels | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v1 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v2 |
| ef:activity/change/20260822T0600486828500000/18322 | synonyms | ef:agent/bootstrap_labels | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v2 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v3 |
| ef:activity/change/20260822T0600486828500000/147616 | context | ef:agent/default_context_mapping | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v3 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v4 |
| ef:activity/change/20260822T0600486828500000/147617 | context_iri | ef:agent/default_context_mapping | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v4 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v5 |
| ef:activity/change/20260822T0600486828500000/218763 | unit_iri | ef:agent/unit_normalization | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v5 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v6 |
| ef:activity/change/20260822T0600486828500000/224883 | prefLabel | ef:agent/normalize_name_case | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v6 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v7 |
| ef:activity/change/20260822T0600486828500000/242718 | properties | ef:agent/enrich_references | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v7 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v8 |
| ef:activity/change/20260822T0600486828500000/242719 | skos_definition | ef:agent/enrich_references | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v8 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v9 |
| ef:activity/change/20260822T0600486828500000/242720 | references | ef:agent/enrich_references | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v9 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v10 |
| ef:activity/change/20260822T0600486828500000/252795 | properties | ef:agent/rdkit_pre_consensus | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v10 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v11 |
| ef:activity/change/20260822T0600486828500000/256565 | altLabel | ef:agent/chebi_altlabels | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v11 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v12 |
| ef:activity/change/20260822T0600486828500000/265007 | altLabel | ef:agent/consensus_match | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v12 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v13 |
| ef:activity/change/20260822T0600486828500000/265008 | cas_match_labels | ef:agent/consensus_match | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v13 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v14 |
| ef:activity/change/20260822T0600486828500000/277996 | properties | ef:agent/opsin_iupac | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v14 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v15 |
| ef:activity/change/20260822T0600486828500000/284724 | properties | ef:agent/rdkit_post_consensus | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v15 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v16 |
| ef:activity/change/20260822T0600486828500000/290612 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v16 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v17 |
| ef:activity/change/20260822T0600486828500000/354830 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v17 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v18 |
| ef:activity/change/20260822T0600486828500000/392353 | properties | ef:agent/normalise_property_values | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v18 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v19 |
| ef:activity/change/20260822T0600486828500000/400782 | types | ef:agent/link_flows_to_their_substance | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v19 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v20 |
| ef:activity/change/20260822T0600486828500000/400783 | properties | ef:agent/link_flows_to_their_substance | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v20 | ef:flow/a4496206-28c2-4048-88f8-1ac44cec97ea/v21 |