Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
cas_match_labels 1 consensus_match group_key=1-methylurea||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'598-50-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-95291b0599f5f7f3: {'598-50-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['598-50-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44383']; candidate_pubchem_cids=[11719]; selected_pubchem_cids=[11719]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,740 bootstrap_labels prefLabel [{"@value":"1-methylurea","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
10,741 bootstrap_labels name 1-methylurea Purged legacy name field to enforce prefLabel usage
10,742 bootstrap_labels synonyms ["methylurea","1-methylurea"] [] Removed legacy synonyms field in favor of structured labels
148,356 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
148,357 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
216,900 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
237,404 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,405 enrich_references skos_definition [{"@value":"A member of the class of ureas that is urea substituted by a methyl group at one of the nitrogen atoms.","@… Merged ChEBI/PubChem definitions into skos:definition
237,406 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.718I","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['598-50-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44383']; candidate_pubchem_cids=[11719]; selected_pubchem_cids=[11719]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,250 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… rdkit_pre_consensus from 'CNC(=O)N'; added: monoisotopic_mass
255,892 chebi_altlabels altLabel [] [{"@value":"Methyl urea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,243 consensus_match altLabel [{"@value":"Methyl urea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Methyl urea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=1-methylurea||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=598-50-5; added Common Chemistry CAS names as altLabel: <em>N</em>-Methylurea, MeSH ID: D008782, Methylurea, Urea, <em>N</em>-methyl-, Urea, methyl-; object_uuid=fo-95291b0599f5f7f3
259,244 consensus_match cas_match_labels {"598-50-5":"exactMatch"} group_key=1-methylurea||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'598-50-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-95291b0599f5f7f3: {'598-50-5': 'exactMatch'}
276,432 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-methylurea'
283,034 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… rdkit_post_consensus from 'CNC(N)=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,524 dedupe_altlabels altLabel [{"@value":"Methyl urea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"Methyl urea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Deduplicated altLabel values and removed entries matching prefLabel
355,193 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a598e416-e5d4-… associations resolved on the elementary layer
390,781 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H6N2O"],… typed the way the ontology types it
398,548 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/10740 prefLabel ef:agent/bootstrap_labels ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v0 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v1
ef:activity/change/20260820T1812399309960000/10741 name ef:agent/bootstrap_labels ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v1 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v2
ef:activity/change/20260820T1812399309960000/10742 synonyms ef:agent/bootstrap_labels ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v2 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v3
ef:activity/change/20260820T1812399309960000/148356 context ef:agent/default_context_mapping ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v3 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v4
ef:activity/change/20260820T1812399309960000/148357 context_iri ef:agent/default_context_mapping ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v4 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v5
ef:activity/change/20260820T1812399309960000/216900 unit_iri ef:agent/unit_normalization ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v5 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v6
ef:activity/change/20260820T1812399309960000/237404 properties ef:agent/enrich_references ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v6 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v7
ef:activity/change/20260820T1812399309960000/237405 skos_definition ef:agent/enrich_references ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v7 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v8
ef:activity/change/20260820T1812399309960000/237406 references ef:agent/enrich_references ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v8 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v9
ef:activity/change/20260820T1812399309960000/251250 properties ef:agent/rdkit_pre_consensus ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v9 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v10
ef:activity/change/20260820T1812399309960000/255892 altLabel ef:agent/chebi_altlabels ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v10 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v11
ef:activity/change/20260820T1812399309960000/259243 altLabel ef:agent/consensus_match ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v11 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v12
ef:activity/change/20260820T1812399309960000/259244 cas_match_labels ef:agent/consensus_match ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v12 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v13
ef:activity/change/20260820T1812399309960000/276432 properties ef:agent/opsin_iupac ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v13 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v14
ef:activity/change/20260820T1812399309960000/283034 properties ef:agent/rdkit_post_consensus ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v14 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v15
ef:activity/change/20260820T1812399309960000/292524 altLabel ef:agent/dedupe_altlabels ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v15 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v16
ef:activity/change/20260820T1812399309960000/355193 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v16 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v17
ef:activity/change/20260820T1812399309960000/390781 properties ef:agent/normalise_property_values ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v17 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v18
ef:activity/change/20260820T1812399309960000/398548 types ef:agent/link_flows_to_their_substance ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v18 ef:flow/a598e416-e5d4-4fa7-a6f9-ead5aa1e883d/v19

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