Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match group_key=diammoniumoxalate||dimension=Environmental > media=Water > water_body=Unknown; cas=1113-38-8; added Common Chemistry CAS names as altLabel: Ethanedioic acid, ammonium salt (1:2), Ethanedioic acid, diammonium salt; object_uuid=fo-25de90dc152b7836
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=1113-38-8; cc_chebi_agreed_name='Ammonium oxalate'; object_uuid=fo-25de90dc152b7836
cas_match_labels 1 consensus_match group_key=diammoniumoxalate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1113-38-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-25de90dc152b7836: {'1113-38-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 214-202-3 from CAS 1113-38-8
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1113-38-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_91241']; candidate_pubchem_cids=[14213, 61721, 13531065, 91996360]; selected_pubchem_cids=[14213]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
506 bootstrap_labels prefLabel [{"@value":"diammonium oxalate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
507 bootstrap_labels name diammonium oxalate Purged legacy name field to enforce prefLabel usage
508 bootstrap_labels synonyms ["AC1L23CN","AMMONIUM OXALATE","Ethanedioic acid diammonium salt","Ethanedioic acid, ammonium salt (1:2)","Ethanedioic… [] Removed legacy synonyms field in favor of structured labels
149,138 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
149,139 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
213,508 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,211 normalize_name_case prefLabel [{"@value":"diammonium oxalate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Diammonium Oxalate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,724 ec_cross_check ec_numbers [] ["214-202-3"] Resolved from EC-inventory: 214-202-3 from CAS 1113-38-8
227,654 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,655 enrich_references skos_definition [{"@value":"An ammonium salt consisting of ammonium and oxalate ions in a 2:1 ratio.","@language":"en","provenance":{"p… Merged ChEBI/PubChem definitions into skos:definition
227,656 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.012.912","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['1113-38-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_91241']; candidate_pubchem_cids=[14213, 61721, 13531065, 91996360]; selected_pubchem_cids=[14213]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,453 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… rdkit_pre_consensus from 'C(=O)(C(=O)[O-])[O-].[NH4+].[NH4+]'; added: monoisotopic_mass
254,451 chebi_altlabels altLabel [] [{"@value":"Ethanedioic acid diammonium salt","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,688 consensus_match prefLabel [{"@value":"Diammonium Oxalate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Ammonium oxalate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=1113-38-8; cc_chebi_agreed_name='Ammonium oxalate'; object_uuid=fo-25de90dc152b7836
265,689 consensus_match altLabel [{"@value":"Ethanedioic acid diammonium salt","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… [{"@value":"Ethanedioic acid diammonium salt","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… cas=1113-38-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-25de90dc152b7836
265,690 consensus_match altLabel [{"@value":"Ethanedioic acid diammonium salt","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… [{"@value":"Ethanedioic acid diammonium salt","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:… group_key=diammoniumoxalate||dimension=Environmental > media=Water > water_body=Unknown; cas=1113-38-8; added Common Chemistry CAS names as altLabel: Ethanedioic acid, ammonium salt (1:2), Ethanedioic acid, diammonium salt; object_uuid=fo-25de90dc152b7836
265,691 consensus_match cas_match_labels {"1113-38-8":"exactMatch"} group_key=diammoniumoxalate||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1113-38-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-25de90dc152b7836: {'1113-38-8': 'exactMatch'}
273,593 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ammonium oxalate'
279,954 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… rdkit_post_consensus from 'O=C([O-])C(=O)[O-].[NH4+].[NH4+]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
355,611 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a70f3087-1420-… associations resolved on the elementary layer
387,870 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H8N2O4",… typed the way the ontology types it
394,389 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/506 prefLabel ef:agent/bootstrap_labels ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v0 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v1
ef:activity/change/20260820T0738569779880000/507 name ef:agent/bootstrap_labels ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v1 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v2
ef:activity/change/20260820T0738569779880000/508 synonyms ef:agent/bootstrap_labels ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v2 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v3
ef:activity/change/20260820T0738569779880000/149138 context ef:agent/default_context_mapping ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v3 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v4
ef:activity/change/20260820T0738569779880000/149139 context_iri ef:agent/default_context_mapping ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v4 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v5
ef:activity/change/20260820T0738569779880000/213508 unit_iri ef:agent/unit_normalization ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v5 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v6
ef:activity/change/20260820T0738569779880000/221211 prefLabel ef:agent/normalize_name_case ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v6 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v7
ef:activity/change/20260820T0738569779880000/226724 ec_numbers ef:agent/ec_cross_check ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v7 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v8
ef:activity/change/20260820T0738569779880000/227654 properties ef:agent/enrich_references ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v8 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v9
ef:activity/change/20260820T0738569779880000/227655 skos_definition ef:agent/enrich_references ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v9 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v10
ef:activity/change/20260820T0738569779880000/227656 references ef:agent/enrich_references ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v10 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v11
ef:activity/change/20260820T0738569779880000/248453 properties ef:agent/rdkit_pre_consensus ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v11 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v12
ef:activity/change/20260820T0738569779880000/254451 altLabel ef:agent/chebi_altlabels ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v12 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v13
ef:activity/change/20260820T0738569779880000/265688 prefLabel ef:agent/consensus_match ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v13 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v14
ef:activity/change/20260820T0738569779880000/265689 altLabel ef:agent/consensus_match ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v14 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v15
ef:activity/change/20260820T0738569779880000/265690 altLabel ef:agent/consensus_match ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v15 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v16
ef:activity/change/20260820T0738569779880000/265691 cas_match_labels ef:agent/consensus_match ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v16 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v17
ef:activity/change/20260820T0738569779880000/273593 properties ef:agent/opsin_iupac ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v17 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v18
ef:activity/change/20260820T0738569779880000/279954 properties ef:agent/rdkit_post_consensus ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v18 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v19
ef:activity/change/20260820T0738569779880000/355611 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v19 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v20
ef:activity/change/20260820T0738569779880000/387870 properties ef:agent/normalise_property_values ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v20 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v21
ef:activity/change/20260820T0738569779880000/394389 types ef:agent/link_flows_to_their_substance ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v21 ef:flow/a70f3087-1420-439a-a3a9-c16c60253920/v22

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