Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'957-68-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-974cb0b51538fa83: {'957-68-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['957-68-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2255']; candidate_pubchem_cids=[13729, 441328, 7174696, 11346310, 14801272, 14801273, 45934635, 60167524, 71432826, 122174092]; selected_pubchem_cids=[441328]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
15,002 bootstrap_labels prefLabel [{"@value":"(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@langu… Bootstrapped prefLabel from legacy name field
15,003 bootstrap_labels name (6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid Purged legacy name field to enforce prefLabel usage
15,004 bootstrap_labels synonyms ["organic","3-acetoxymethylen-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylicacid","7-aca","7-acs","7-am… [] Removed legacy synonyms field in favor of structured labels
149,634 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
149,635 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
218,287 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,558 normalize_name_case prefLabel [{"@value":"(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@langu… [{"@value":"(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic Acid","@langu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,361 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,362 enrich_references skos_definition [{"@value":"The α,β-unsaturated monocarboxylic acid that is the active nucleus for the synthesis of cephalosporins and… Merged ChEBI/PubChem definitions into skos:definition
241,363 enrich_references references [] [{"@id":"beilstein:8919572","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['957-68-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2255']; candidate_pubchem_cids=[13729, 441328, 7174696, 11346310, 14801272, 14801273, 45934635, 60167524, 71432826, 122174092]; selected_pubchem_cids=[441328]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,410 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… rdkit_pre_consensus from 'CC(=O)OCC1=C(N2C(C(C2=O)N)SC1)C(=O)O'; added: inchi2d_string, monoisotopic_mass
256,389 chebi_altlabels altLabel [] [{"@value":"(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@language":… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,811 consensus_match altLabel [{"@value":"(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@language":… [{"@value":"(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@language":… group_key=(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=957-68-6; added Common Chemistry CAS names as altLabel: (6<em>R</em>,7<em>R</em>)-3-[(Acetyloxy)methyl]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, (7<em>R</em>)-7-Aminocephalosporanic acid, 3-(Acetoxymethyl)-7-aminocephem-4-carboxylic acid, 3-Acetoxymethyl-7-aminoceph-3-em-4-carboxylic acid, 3-Acetoxymethyl-7β-aminoceph-3-em-4-carboxylic acid, 5-Thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, 3-[(acetyloxy)methyl]-7-amino-8-oxo-, (6<em>R</em>,7<em>R</em>)-, 5-Thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, 3-[(acetyloxy)methyl]-7-amino-8-oxo-, (6<em>R</em>-<em>trans</em>)-, 5-Thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, 7-amino-3-(hydroxymethyl)-8-oxo-, acetate (ester), 7-ACS, 7-Amino-3-acetoxymethyl-3-cephem-4-carboxylic acid, 7-Amino-3-acetoxymethyl-Δ<sup>3</sup>-cephem-4-carboxylic acid, 7β-Amino-3-acetoxymethylcephemcarboxylic acid, 7β-Aminocephalosporanic acid; object_uuid=fo-974cb0b51538fa83
257,812 consensus_match cas_match_labels {"957-68-6":"exactMatch"} group_key=(6r,7r)-3-[(acetyloxy)methyl)]-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'957-68-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-974cb0b51538fa83: {'957-68-6': 'exactMatch'}
277,616 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid'
284,314 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… rdkit_post_consensus from 'CC(=O)OCC1=C(C(=O)O)N2C(=O)[C@@H](N)[C@H]2SC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,824 dedupe_altlabels altLabel [{"@value":"(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@language":… [{"@value":"(6R,7R)-3-(acetoxymethyl)-7-amino-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid","@language":… Deduplicated altLabel values and removed entries matching prefLabel
355,859 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a7da3715-df31-… associations resolved on the elementary layer
391,974 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… typed the way the ontology types it
400,237 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,238 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H12N2O5… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/15002 prefLabel ef:agent/bootstrap_labels ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v0 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v1
ef:activity/change/20260820T0738569779880000/15003 name ef:agent/bootstrap_labels ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v1 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v2
ef:activity/change/20260820T0738569779880000/15004 synonyms ef:agent/bootstrap_labels ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v2 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v3
ef:activity/change/20260820T0738569779880000/149634 context ef:agent/default_context_mapping ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v3 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v4
ef:activity/change/20260820T0738569779880000/149635 context_iri ef:agent/default_context_mapping ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v4 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v5
ef:activity/change/20260820T0738569779880000/218287 unit_iri ef:agent/unit_normalization ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v5 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v6
ef:activity/change/20260820T0738569779880000/224558 prefLabel ef:agent/normalize_name_case ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v6 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v7
ef:activity/change/20260820T0738569779880000/241361 properties ef:agent/enrich_references ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v7 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v8
ef:activity/change/20260820T0738569779880000/241362 skos_definition ef:agent/enrich_references ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v8 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v9
ef:activity/change/20260820T0738569779880000/241363 references ef:agent/enrich_references ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v9 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v10
ef:activity/change/20260820T0738569779880000/252410 properties ef:agent/rdkit_pre_consensus ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v10 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v11
ef:activity/change/20260820T0738569779880000/256389 altLabel ef:agent/chebi_altlabels ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v11 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v12
ef:activity/change/20260820T0738569779880000/257811 altLabel ef:agent/consensus_match ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v12 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v13
ef:activity/change/20260820T0738569779880000/257812 cas_match_labels ef:agent/consensus_match ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v13 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v14
ef:activity/change/20260820T0738569779880000/277616 properties ef:agent/opsin_iupac ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v14 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v15
ef:activity/change/20260820T0738569779880000/284314 properties ef:agent/rdkit_post_consensus ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v15 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v16
ef:activity/change/20260820T0738569779880000/292824 altLabel ef:agent/dedupe_altlabels ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v16 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v17
ef:activity/change/20260820T0738569779880000/355859 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v17 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v18
ef:activity/change/20260820T0738569779880000/391974 properties ef:agent/normalise_property_values ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v18 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v19
ef:activity/change/20260820T0738569779880000/400237 types ef:agent/link_flows_to_their_substance ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v19 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v20
ef:activity/change/20260820T0738569779880000/400238 properties ef:agent/link_flows_to_their_substance ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v20 ef:flow/a7da3715-df31-43a5-a637-5308328beaa6/v21

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