Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match group_key=2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane||dimension=Environmental > media=Water > water_body=Ocean; cas=108-62-3; added Common Chemistry CAS names as altLabel: 1,3,5,7-Tetroxocane, 2,4,6,8-tetramethyl-, Slugfest; object_uuid=fo-820353983479a219
prefLabel 2 bootstrap_labels, consensus_match cas=108-62-3; cc_chebi_agreed_name='Metaldehyde'; object_uuid=fo-820353983479a219
cas_match_labels 1 consensus_match group_key=2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'108-62-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-820353983479a219: {'108-62-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['108-62-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81931']; candidate_pubchem_cids=[712, 61021]; selected_pubchem_cids=[61021]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
4,987 bootstrap_labels prefLabel [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… Bootstrapped prefLabel from legacy name field
4,988 bootstrap_labels name 2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane Purged legacy name field to enforce prefLabel usage
4,989 bootstrap_labels synonyms ["1,3,5,7-Tetroxocane, 2,4,6,8-tetramethyl-","2,4,6,8-Tetramethyl-1,3,5,7-tetraoxocane","2,4,6,8-Tetramethyl-1,3,5,7-te… [] Removed legacy synonyms field in favor of structured labels
149,838 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
149,839 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
215,011 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
231,982 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,983 enrich_references skos_definition [{"@value":"A member of the class of tetroxocanes that is 1,3,5,7-tetroxocane which carries four methyl groups at posit… Merged ChEBI/PubChem definitions into skos:definition
231,984 enrich_references references [] [{"@id":"agr:IND606799146","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['108-62-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81931']; candidate_pubchem_cids=[712, 61021]; selected_pubchem_cids=[61021]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,703 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… rdkit_pre_consensus from 'CC1OC(C)OC(C)OC(C)O1'; added: monoisotopic_mass
255,021 chebi_altlabels altLabel [] [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… Added 16 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,873 consensus_match prefLabel [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane","@language":"en","source":{"prov:wasGeneratedBy":"bootstra… [{"@value":"Metaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… cas=108-62-3; cc_chebi_agreed_name='Metaldehyde'; object_uuid=fo-820353983479a219
259,874 consensus_match altLabel [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… cas=108-62-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-820353983479a219
259,875 consensus_match altLabel [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… [{"@value":"2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… group_key=2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane||dimension=Environmental > media=Water > water_body=Ocean; cas=108-62-3; added Common Chemistry CAS names as altLabel: 1,3,5,7-Tetroxocane, 2,4,6,8-tetramethyl-, Slugfest; object_uuid=fo-820353983479a219
259,876 consensus_match cas_match_labels {"108-62-3":"exactMatch"} group_key=2,4,6,8-tetramethyl-1,3,5,7-tetraoxacyclooctane||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'108-62-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-820353983479a219: {'108-62-3': 'exactMatch'}
274,853 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,4,6,8-tetramethyl-1,3,5,7-tetraoxocane'
281,320 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… rdkit_post_consensus from 'CC1OC(C)OC(C)OC(C)O1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
355,961 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a82f7192-7d25-… associations resolved on the elementary layer
389,157 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H16O4"],… typed the way the ontology types it
396,185 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,186 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33904","rdfs:label":"molluscicide","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/4987 prefLabel ef:agent/bootstrap_labels ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v0 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v1
ef:activity/change/20260820T0738569779880000/4988 name ef:agent/bootstrap_labels ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v1 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v2
ef:activity/change/20260820T0738569779880000/4989 synonyms ef:agent/bootstrap_labels ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v2 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v3
ef:activity/change/20260820T0738569779880000/149838 context ef:agent/default_context_mapping ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v3 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v4
ef:activity/change/20260820T0738569779880000/149839 context_iri ef:agent/default_context_mapping ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v4 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v5
ef:activity/change/20260820T0738569779880000/215011 unit_iri ef:agent/unit_normalization ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v5 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v6
ef:activity/change/20260820T0738569779880000/231982 properties ef:agent/enrich_references ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v6 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v7
ef:activity/change/20260820T0738569779880000/231983 skos_definition ef:agent/enrich_references ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v7 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v8
ef:activity/change/20260820T0738569779880000/231984 references ef:agent/enrich_references ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v8 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v9
ef:activity/change/20260820T0738569779880000/249703 properties ef:agent/rdkit_pre_consensus ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v9 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v10
ef:activity/change/20260820T0738569779880000/255021 altLabel ef:agent/chebi_altlabels ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v10 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v11
ef:activity/change/20260820T0738569779880000/259873 prefLabel ef:agent/consensus_match ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v11 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v12
ef:activity/change/20260820T0738569779880000/259874 altLabel ef:agent/consensus_match ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v12 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v13
ef:activity/change/20260820T0738569779880000/259875 altLabel ef:agent/consensus_match ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v13 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v14
ef:activity/change/20260820T0738569779880000/259876 cas_match_labels ef:agent/consensus_match ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v14 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v15
ef:activity/change/20260820T0738569779880000/274853 properties ef:agent/opsin_iupac ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v15 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v16
ef:activity/change/20260820T0738569779880000/281320 properties ef:agent/rdkit_post_consensus ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v16 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v17
ef:activity/change/20260820T0738569779880000/355961 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v17 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v18
ef:activity/change/20260820T0738569779880000/389157 properties ef:agent/normalise_property_values ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v18 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v19
ef:activity/change/20260820T0738569779880000/396185 types ef:agent/link_flows_to_their_substance ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v19 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v20
ef:activity/change/20260820T0738569779880000/396186 roles ef:agent/link_flows_to_their_substance ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v20 ef:flow/a82f7192-7d25-4141-b774-5cb26575cbba/v21

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