Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NSC 10464' (registry code), 'NSC 215214' (registry code), 'TY 9' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=phenolphthalein||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'77-09-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-415819e5ca9c642c: {'77-09-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['77-09-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34914']; candidate_pubchem_cids=[4764, 9723]; selected_pubchem_cids=[4764]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
5,298 bootstrap_labels prefLabel [{"@value":"phenolphthalein","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Bootstrapped prefLabel from legacy name field
5,299 bootstrap_labels name phenolphthalein Purged legacy name field to enforce prefLabel usage
5,300 bootstrap_labels synonyms ["1(3H)-Isobenzofuranone, 3,3-bis(4-hydroxyphenyl)-","2-[Bis (4-hydroxyphenyl)methyl]benzoic acid","3,3-Bis(4-hydroxyph… [] Removed legacy synonyms field in favor of structured labels
150,726 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
150,727 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
215,108 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,315 normalize_name_case prefLabel [{"@value":"phenolphthalein","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… [{"@value":"Phenolphthalein","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
232,273 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,274 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
232,275 enrich_references references [] [{"@id":"drugcentral:2135","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['77-09-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34914']; candidate_pubchem_cids=[4764, 9723]; selected_pubchem_cids=[4764]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,780 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… rdkit_pre_consensus from 'C1=CC=C2C(=C1)C(=O)OC2(C3=CC=C(C=C3)O)C4=CC=C(C=C4)O'; added: monoisotopic_mass
255,051 chebi_altlabels altLabel [] [{"@value":"3,3-Bis(4-hydroxyphenyl)phthalide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,611 consensus_match altLabel [{"@value":"3,3-Bis(4-hydroxyphenyl)phthalide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… [{"@value":"3,3-Bis(4-hydroxyphenyl)phthalide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… group_key=phenolphthalein||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); cas=77-09-8; added Common Chemistry CAS names as altLabel: 1(3<em>H</em>)-Isobenzofuranone, 3,3-bis(4-hydroxyphenyl)-, 3,3-Bis(4-hydroxyphenyl)-1(3<em>H</em>)-isobenzofuranone, 3,3-Bis(4-hydroxyphenyl)-2-benzofuran-1-one, 3,3-Bis(<em>p</em>-hydroxyphenyl)phthalide, 3,3-Bis-(4-hydroxy-phenyl)-3<em>H</em>-isobenzofuran-1-one, Koprol, Laxogen, Lilo, MeSH ID: D020113, NSC 10464, NSC 215214, PX 0520-1, Purga, Purgen, Purgophen, Spulmako-lax, TY 9, Trilax; object_uuid=fo-415819e5ca9c642c
270,612 consensus_match cas_match_labels {"77-09-8":"exactMatch"} group_key=phenolphthalein||dimension=Environmental > media=Air > strata=Medium stack, <150 meters > population_density=Rural (<1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'77-09-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-415819e5ca9c642c: {'77-09-8': 'exactMatch'}
274,920 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3,3-Bis(4-hydroxyphenyl)phthalide'
281,396 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… rdkit_post_consensus from 'O=C1OC(c2ccc(O)cc2)(c2ccc(O)cc2)c2ccccc21'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,340 strip_catalogue_altlabels altLabel [{"@value":"3,3-Bis(4-hydroxyphenyl)phthalide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… [{"@value":"3,3-Bis(4-hydroxyphenyl)phthalide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… Removed 3 catalogue altLabel value(s): 'NSC 10464' (registry code), 'NSC 215214' (registry code), 'TY 9' (grade code)
356,385 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a9b12267-894e-… associations resolved on the elementary layer
389,225 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H14O4"]… typed the way the ontology types it
396,282 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/5298 prefLabel ef:agent/bootstrap_labels ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v0 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v1
ef:activity/change/20260821T1554374006150000/5299 name ef:agent/bootstrap_labels ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v1 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v2
ef:activity/change/20260821T1554374006150000/5300 synonyms ef:agent/bootstrap_labels ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v2 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v3
ef:activity/change/20260821T1554374006150000/150726 context ef:agent/default_context_mapping ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v3 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v4
ef:activity/change/20260821T1554374006150000/150727 context_iri ef:agent/default_context_mapping ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v4 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v5
ef:activity/change/20260821T1554374006150000/215108 unit_iri ef:agent/unit_normalization ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v5 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v6
ef:activity/change/20260821T1554374006150000/222315 prefLabel ef:agent/normalize_name_case ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v6 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v7
ef:activity/change/20260821T1554374006150000/232273 properties ef:agent/enrich_references ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v7 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v8
ef:activity/change/20260821T1554374006150000/232274 skos_definition ef:agent/enrich_references ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v8 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v9
ef:activity/change/20260821T1554374006150000/232275 references ef:agent/enrich_references ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v9 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v10
ef:activity/change/20260821T1554374006150000/249780 properties ef:agent/rdkit_pre_consensus ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v10 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v11
ef:activity/change/20260821T1554374006150000/255051 altLabel ef:agent/chebi_altlabels ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v11 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v12
ef:activity/change/20260821T1554374006150000/270611 altLabel ef:agent/consensus_match ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v12 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v13
ef:activity/change/20260821T1554374006150000/270612 cas_match_labels ef:agent/consensus_match ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v13 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v14
ef:activity/change/20260821T1554374006150000/274920 properties ef:agent/opsin_iupac ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v14 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v15
ef:activity/change/20260821T1554374006150000/281396 properties ef:agent/rdkit_post_consensus ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v15 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v16
ef:activity/change/20260821T1554374006150000/288340 altLabel ef:agent/strip_catalogue_altlabels ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v16 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v17
ef:activity/change/20260821T1554374006150000/356385 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v17 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v18
ef:activity/change/20260821T1554374006150000/389225 properties ef:agent/normalise_property_values ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v18 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v19
ef:activity/change/20260821T1554374006150000/396282 types ef:agent/link_flows_to_their_substance ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v19 ef:flow/a9b12267-894e-4862-aa4e-5ebece81964d/v20

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