Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=propane-1-thiol||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-03-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-07c178ca12d3e442: {'107-03-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['107-03-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8473']; candidate_pubchem_cids=[7848, 45042960]; selected_pubchem_cids=[7848]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
3,194 bootstrap_labels prefLabel [{"@value":"propane-1-thiol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Bootstrapped prefLabel from legacy name field
3,195 bootstrap_labels name propane-1-thiol Purged legacy name field to enforce prefLabel usage
3,196 bootstrap_labels synonyms ["1-Mercaptopropane","1-Propanethiol","1-Propyl mercaptan","1-Propylmercaptan","AC1L1POU","AC1Q7GOX","AKOS000121933","I… [] Removed legacy synonyms field in favor of structured labels
150,730 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
150,731 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
214,405 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,819 normalize_name_case prefLabel [{"@value":"propane-1-thiol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… [{"@value":"Propane-1-thiol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
230,251 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,252 enrich_references skos_definition [{"@value":"An alkanethiol that is propane substituted by a thiol group at position 1.","@language":"en","provenance":{… Merged ChEBI/PubChem definitions into skos:definition
230,253 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J4.046K","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['107-03-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8473']; candidate_pubchem_cids=[7848, 45042960]; selected_pubchem_cids=[7848]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,207 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… rdkit_pre_consensus from 'CCCS'; added: monoisotopic_mass
254,745 chebi_altlabels altLabel [] [{"@value":"1-Mercaptopropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,035 consensus_match altLabel [{"@value":"1-Mercaptopropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"1-Mercaptopropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… group_key=propane-1-thiol||dimension=Environmental > media=Ground > geography=Agricultural; cas=107-03-9; added Common Chemistry CAS names as altLabel: 1-Propanethiol, 1-Propylthiol, <em>n</em>-Propanethiol; object_uuid=fo-07c178ca12d3e442
271,036 consensus_match cas_match_labels {"107-03-9":"exactMatch"} group_key=propane-1-thiol||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-03-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-07c178ca12d3e442: {'107-03-9': 'exactMatch'}
274,321 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Propane-1-thiol'
280,754 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… rdkit_post_consensus from 'CCCS'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,154 dedupe_altlabels altLabel [{"@value":"1-Mercaptopropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… [{"@value":"1-Mercaptopropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… Deduplicated altLabel values and removed entries matching prefLabel
356,387 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/a9b409f1-646c-… associations resolved on the elementary layer
388,618 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H8S"],"a… typed the way the ontology types it
395,430 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/3194 prefLabel ef:agent/bootstrap_labels ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v0 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v1
ef:activity/change/20260821T1554374006150000/3195 name ef:agent/bootstrap_labels ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v1 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v2
ef:activity/change/20260821T1554374006150000/3196 synonyms ef:agent/bootstrap_labels ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v2 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v3
ef:activity/change/20260821T1554374006150000/150730 context ef:agent/default_context_mapping ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v3 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v4
ef:activity/change/20260821T1554374006150000/150731 context_iri ef:agent/default_context_mapping ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v4 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v5
ef:activity/change/20260821T1554374006150000/214405 unit_iri ef:agent/unit_normalization ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v5 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v6
ef:activity/change/20260821T1554374006150000/221819 prefLabel ef:agent/normalize_name_case ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v6 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v7
ef:activity/change/20260821T1554374006150000/230251 properties ef:agent/enrich_references ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v7 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v8
ef:activity/change/20260821T1554374006150000/230252 skos_definition ef:agent/enrich_references ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v8 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v9
ef:activity/change/20260821T1554374006150000/230253 references ef:agent/enrich_references ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v9 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v10
ef:activity/change/20260821T1554374006150000/249207 properties ef:agent/rdkit_pre_consensus ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v10 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v11
ef:activity/change/20260821T1554374006150000/254745 altLabel ef:agent/chebi_altlabels ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v11 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v12
ef:activity/change/20260821T1554374006150000/271035 altLabel ef:agent/consensus_match ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v12 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v13
ef:activity/change/20260821T1554374006150000/271036 cas_match_labels ef:agent/consensus_match ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v13 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v14
ef:activity/change/20260821T1554374006150000/274321 properties ef:agent/opsin_iupac ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v14 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v15
ef:activity/change/20260821T1554374006150000/280754 properties ef:agent/rdkit_post_consensus ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v15 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v16
ef:activity/change/20260821T1554374006150000/292154 altLabel ef:agent/dedupe_altlabels ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v16 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v17
ef:activity/change/20260821T1554374006150000/356387 concept_associations ef:agent/carry_associations_onto_flows ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v17 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v18
ef:activity/change/20260821T1554374006150000/388618 properties ef:agent/normalise_property_values ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v18 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v19
ef:activity/change/20260821T1554374006150000/395430 types ef:agent/link_flows_to_their_substance ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v19 ef:flow/a9b409f1-646c-4bfd-884a-e17a37ac4f35/v20

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