3,7-dihydroxy-12-oxocholan-24-oic Acid
Everything that changed this flow. Back to the flow
ac84dc51-d958-46b2-a3c5-a85a655996f4
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=3,7-dihydroxy-12-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'2458-08-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-07445e4e7a446ead: {'2458-08-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2458-08-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16312']; candidate_pubchem_cids=[94235, 102792, 500164]; selected_pubchem_cids=[94235]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 317 | bootstrap_labels | prefLabel | — | [{"@value":"3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels"… | Bootstrapped prefLabel from legacy name field |
| 318 | bootstrap_labels | name | 3,7-dihydroxy-12-oxocholan-24-oic acid | — | Purged legacy name field to enforce prefLabel usage |
| 319 | bootstrap_labels | synonyms | ["organic"] | [] | Removed legacy synonyms field in favor of structured labels |
| 152,462 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 152,463 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 213,444 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,165 | normalize_name_case | prefLabel | [{"@value":"3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels"… | [{"@value":"3,7-dihydroxy-12-oxocholan-24-oic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 227,472 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 227,473 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 227,474 | enrich_references | references | [] | [{"@id":"beilstein:3224670","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['2458-08-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16312']; candidate_pubchem_cids=[94235, 102792, 500164]; selected_pubchem_cids=[94235]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,400 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | rdkit_pre_consensus from 'CC(CCC(=O)O)C1CCC2C1(C(=O)CC3C2C(CC4C3(CCC(C4)O)C)O)C'; added: inchi2d_string, monoisotopic_mass |
| 254,423 | chebi_altlabels | altLabel | [] | [{"@value":"(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGenerated… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 261,683 | consensus_match | altLabel | [{"@value":"(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGenerated… | [{"@value":"(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGenerated… | group_key=3,7-dihydroxy-12-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=2458-08-4; added Common Chemistry CAS names as altLabel: (3α,5β,7α)-3,7-Dihydroxy-12-oxocholan-24-oic acid, 12-<em>keto</em>-Chenodeoxycholic acid, 12-Keto-3α,7α-dihydroxy-5β-cholanic acid, 12-Ketochenodeoxycholic acid, 12-Ketocholic acid, 12-Oxo-3α,7α-dihydroxy-5β-cholan-24-oic acid, 12-Oxochenodeoxycholic acid, 12-Oxocholic acid, 3α,7α-Dihydroxy-12-<em>keto</em>-5β-cholanic acid, 3α,7α-Dihydroxy-12-ketocholanic acid, 3α,7α-Dihydroxy-12-ketocholic acid, 3α,7α-Dihydroxy-12-oxo-5β-cholan-24-oic acid, 3α,7α-Dihydroxy-12-oxo-5β-cholanic acid, 3α,7α-Dihydroxy-12-oxo-5β-cholanoic acid, 3α,7α-Dihydroxy-12-oxocholic acid, 5β-Cholan-24-oic acid, 3α,7α-dihydroxy-12-oxo-, 5β-Cholanic acid, 3α,7α-dihydroxy-12-oxo-, 5β-Cholanic acid-3α,7α-diol-12-one, Cholan-24-oic acid, 3,7-dihydroxy-12-oxo-, (3α,5β,7α)-; object_uuid=fo-07445e4e7a446ead |
| 261,684 | consensus_match | cas_match_labels | — | {"2458-08-4":"exactMatch"} | group_key=3,7-dihydroxy-12-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'2458-08-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-07445e4e7a446ead: {'2458-08-4': 'exactMatch'} |
| 273,541 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid' |
| 279,897 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | rdkit_post_consensus from 'C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC(=O)[C@]12C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,982 | dedupe_altlabels | altLabel | [{"@value":"(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGenerated… | [{"@value":"(3alpha,5beta,7alpha)-3,7-dihydroxy-12-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGenerated… | Deduplicated altLabel values and removed entries matching prefLabel |
| 357,274 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ac84dc51-d958-… | associations resolved on the elementary layer |
| 387,818 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | typed the way the ontology types it |
| 394,308 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 394,309 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O5"]… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/317 | prefLabel | ef:agent/bootstrap_labels | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v0 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v1 |
| ef:activity/change/20260820T0738569779880000/318 | name | ef:agent/bootstrap_labels | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v1 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v2 |
| ef:activity/change/20260820T0738569779880000/319 | synonyms | ef:agent/bootstrap_labels | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v2 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v3 |
| ef:activity/change/20260820T0738569779880000/152462 | context | ef:agent/default_context_mapping | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v3 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v4 |
| ef:activity/change/20260820T0738569779880000/152463 | context_iri | ef:agent/default_context_mapping | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v4 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v5 |
| ef:activity/change/20260820T0738569779880000/213444 | unit_iri | ef:agent/unit_normalization | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v5 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v6 |
| ef:activity/change/20260820T0738569779880000/221165 | prefLabel | ef:agent/normalize_name_case | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v6 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v7 |
| ef:activity/change/20260820T0738569779880000/227472 | properties | ef:agent/enrich_references | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v7 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v8 |
| ef:activity/change/20260820T0738569779880000/227473 | skos_definition | ef:agent/enrich_references | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v8 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v9 |
| ef:activity/change/20260820T0738569779880000/227474 | references | ef:agent/enrich_references | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v9 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v10 |
| ef:activity/change/20260820T0738569779880000/248400 | properties | ef:agent/rdkit_pre_consensus | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v10 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v11 |
| ef:activity/change/20260820T0738569779880000/254423 | altLabel | ef:agent/chebi_altlabels | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v11 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v12 |
| ef:activity/change/20260820T0738569779880000/261683 | altLabel | ef:agent/consensus_match | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v12 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v13 |
| ef:activity/change/20260820T0738569779880000/261684 | cas_match_labels | ef:agent/consensus_match | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v13 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v14 |
| ef:activity/change/20260820T0738569779880000/273541 | properties | ef:agent/opsin_iupac | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v14 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v15 |
| ef:activity/change/20260820T0738569779880000/279897 | properties | ef:agent/rdkit_post_consensus | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v15 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v16 |
| ef:activity/change/20260820T0738569779880000/291982 | altLabel | ef:agent/dedupe_altlabels | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v16 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v17 |
| ef:activity/change/20260820T0738569779880000/357274 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v17 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v18 |
| ef:activity/change/20260820T0738569779880000/387818 | properties | ef:agent/normalise_property_values | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v18 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v19 |
| ef:activity/change/20260820T0738569779880000/394308 | types | ef:agent/link_flows_to_their_substance | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v19 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v20 |
| ef:activity/change/20260820T0738569779880000/394309 | properties | ef:agent/link_flows_to_their_substance | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v20 | ef:flow/ac84dc51-d958-46b2-a3c5-a85a655996f4/v21 |