Brightway Flows 1.0
GitHub

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
cas_match_labels 1 consensus_match group_key=quizalofop-p||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'94051-08-8': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aa0f8628601de14c: {'94051-08-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['94051-08-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_137507']; candidate_pubchem_cids=[178795, 5484172]; selected_pubchem_cids=[5484172]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
24,754 bootstrap_labels prefLabel — [{"@value":"Quizalofop-P","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"b… Bootstrapped prefLabel from legacy name field
24,755 bootstrap_labels name Quizalofop-P — Purged legacy name field to enforce prefLabel usage
24,756 bootstrap_labels synonyms ["(R)-2-[4-(6-chloroquinoxalin-2-yloxy)phenoxy]propionic acid"] [] Removed legacy synonyms field in favor of structured labels
152,979 default_context_mapping context — {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
152,980 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
220,887 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
248,102 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
248,103 enrich_references skos_definition — [{"@value":"A 2-{4-[(6-chloroquinoxalin-2-yl)oxy]phenoxy}propanoic acid that has R configuration. An acetyl-CoA carboxy… Merged ChEBI/PubChem definitions into skos:definition
248,104 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J562.888A","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['94051-08-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_137507']; candidate_pubchem_cids=[178795, 5484172]; selected_pubchem_cids=[5484172]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,336 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… rdkit_pre_consensus from 'CC(C(=O)O)OC1=CC=C(C=C1)OC2=CN=C3C=C(C=CC3=N2)Cl'; added: inchi2d_string, monoisotopic_mass
257,360 chebi_altlabels altLabel [] [{"@value":"(+)-quizalofop","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,280 consensus_match altLabel [{"@value":"(+)-quizalofop","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+)-quizalofop","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… group_key=quizalofop-p||dimension=Environmental > media=Ground > geography=Agricultural; cas=94051-08-8; added Common Chemistry CAS names as altLabel: <em>R</em>-Quizalofop, Propanoic acid, 2-[4-[(6-chloro-2-quinoxalinyl)oxy]phenoxy]-, (2<em>R</em>)-, Propanoic acid, 2-[4-[(6-chloro-2-quinoxalinyl)oxy]phenoxy]-, (<em>R</em>)-, Propaquizafop free acid; object_uuid=fo-aa0f8628601de14c
271,281 consensus_match cas_match_labels — {"94051-08-8":"exactMatch"} group_key=quizalofop-p||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'94051-08-8': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aa0f8628601de14c: {'94051-08-8': 'exactMatch'}
279,681 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2R)-2-[4-[(6-chloro-2-quinoxalinyl)oxy]phenoxy]propanoic acid'
286,567 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… rdkit_post_consensus from 'C[C@@H](Oc1ccc(Oc2cnc3cc(Cl)ccc3n2)cc1)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
293,209 dedupe_altlabels altLabel [{"@value":"(+)-quizalofop","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… [{"@value":"(+)-quizalofop","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"… Deduplicated altLabel values and removed entries matching prefLabel
357,545 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ad5f906d-29a9-… associations resolved on the elementary layer
394,105 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… typed the way the ontology types it
403,516 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,517 link_flows_to_their_substance roles — [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow
403,518 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H13ClN2… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/24754 prefLabel ef:agent/bootstrap_labels ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v0 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v1
ef:activity/change/20261019T0712047113160000/24755 name ef:agent/bootstrap_labels ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v1 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v2
ef:activity/change/20261019T0712047113160000/24756 synonyms ef:agent/bootstrap_labels ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v2 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v3
ef:activity/change/20261019T0712047113160000/152979 context ef:agent/default_context_mapping ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v3 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v4
ef:activity/change/20261019T0712047113160000/152980 context_iri ef:agent/default_context_mapping ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v4 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v5
ef:activity/change/20261019T0712047113160000/220887 unit_iri ef:agent/unit_normalization ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v5 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v6
ef:activity/change/20261019T0712047113160000/248102 properties ef:agent/enrich_references ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v6 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v7
ef:activity/change/20261019T0712047113160000/248103 skos_definition ef:agent/enrich_references ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v7 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v8
ef:activity/change/20261019T0712047113160000/248104 references ef:agent/enrich_references ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v8 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v9
ef:activity/change/20261019T0712047113160000/254336 properties ef:agent/rdkit_pre_consensus ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v9 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v10
ef:activity/change/20261019T0712047113160000/257360 altLabel ef:agent/chebi_altlabels ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v10 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v11
ef:activity/change/20261019T0712047113160000/271280 altLabel ef:agent/consensus_match ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v11 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v12
ef:activity/change/20261019T0712047113160000/271281 cas_match_labels ef:agent/consensus_match ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v12 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v13
ef:activity/change/20261019T0712047113160000/279681 properties ef:agent/opsin_iupac ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v13 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v14
ef:activity/change/20261019T0712047113160000/286567 properties ef:agent/rdkit_post_consensus ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v14 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v15
ef:activity/change/20261019T0712047113160000/293209 altLabel ef:agent/dedupe_altlabels ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v15 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v16
ef:activity/change/20261019T0712047113160000/357545 concept_associations ef:agent/carry_associations_onto_flows ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v16 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v17
ef:activity/change/20261019T0712047113160000/394105 properties ef:agent/normalise_property_values ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v17 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v18
ef:activity/change/20261019T0712047113160000/403516 types ef:agent/link_flows_to_their_substance ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v18 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v19
ef:activity/change/20261019T0712047113160000/403517 roles ef:agent/link_flows_to_their_substance ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v19 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v20
ef:activity/change/20261019T0712047113160000/403518 properties ef:agent/link_flows_to_their_substance ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v20 ef:flow/ad5f906d-29a9-4b03-820c-2bf748c928fb/v21

Keyboard

?
Show or hide this map
/
Focus search
Esc
Close