Cysteine Hydrochloride
Everything that changed this flow. Back to the flow
ad9025d4-6274-43ac-9c95-890439407389
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'CSKE 200' (grade code), 'WR 348' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=cysteinehydrochloride||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'52-89-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fac64e6121b55780: {'52-89-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['52-89-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_91247']; candidate_pubchem_cids=[594, 5862, 23462, 25150, 60960, 11030077, 60208009, 170923172]; selected_pubchem_cids=[60960]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 21,342 | bootstrap_labels | prefLabel | — | [{"@value":"cysteine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… | Bootstrapped prefLabel from legacy name field |
| 21,343 | bootstrap_labels | name | cysteine hydrochloride | — | Purged legacy name field to enforce prefLabel usage |
| 21,344 | bootstrap_labels | synonyms | ["organic","cysteinehydrochloride","l-cysteinehydrochloridemonohydrate"] | [] | Removed legacy synonyms field in favor of structured labels |
| 153,104 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 153,105 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 220,196 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,924 | normalize_name_case | prefLabel | [{"@value":"cysteine hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… | [{"@value":"Cysteine Hydrochloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 246,716 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 246,717 | enrich_references | skos_definition | — | [{"@value":"A hydrochloride obtained by combining L-cysteine with one molar equivalent of hydrogen chloride.","@languag… | Merged ChEBI/PubChem definitions into skos:definition |
| 246,718 | enrich_references | references | [] | [{"@id":"https://chem.echa.europa.eu/100.000.144","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… | Added references with provenance; cas_numbers=['52-89-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_91247']; candidate_pubchem_cids=[594, 5862, 23462, 25150, 60960, 11030077, 60208009, 170923172]; selected_pubchem_cids=[60960]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,956 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | rdkit_pre_consensus from 'C(C(C(=O)O)N)S.Cl'; added: inchi2d_string, monoisotopic_mass |
| 257,077 | chebi_altlabels | altLabel | [] | [{"@value":"(1R)-1-carboxy-2-sulfanylethan-1-aminium chloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,505 | consensus_match | altLabel | [{"@value":"(1R)-1-carboxy-2-sulfanylethan-1-aminium chloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… | [{"@value":"(1R)-1-carboxy-2-sulfanylethan-1-aminium chloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… | group_key=cysteinehydrochloride||dimension=Environmental > media=Air > indoor=Unknown; cas=52-89-1; added Common Chemistry CAS names as altLabel: (2R)-2-Amino-3-sulfanylpropanoic acid hydrochloride, (R)-1-Carboxy-2-mercaptoethanaminium chloride, <span class="text-smallcaps">L</span>-Cysteine, hydrochloride, <span class="text-smallcaps">L</span>-Cysteine, hydrochloride (1:1), CSKE 200, Cystein chloride, Cysteine chlorohydrate, Cysteine, hydrochloride, <span class="text-smallcaps">L</span>-, WR 348; object_uuid=fo-fac64e6121b55780 |
| 265,506 | consensus_match | cas_match_labels | — | {"52-89-1":"exactMatch"} | group_key=cysteinehydrochloride||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'52-89-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fac64e6121b55780: {'52-89-1': 'exactMatch'} |
| 279,146 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Cysteine Hydrochloride' |
| 286,000 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | rdkit_post_consensus from 'Cl.N[C@@H](CS)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,448 | strip_catalogue_altlabels | altLabel | [{"@value":"(1R)-1-carboxy-2-sulfanylethan-1-aminium chloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… | [{"@value":"(1R)-1-carboxy-2-sulfanylethan-1-aminium chloride","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… | Removed 2 catalogue altLabel value(s): 'CSKE 200' (grade code), 'WR 348' (grade code) |
| 357,575 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ad9025d4-6274-… | associations resolved on the elementary layer |
| 393,535 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | typed the way the ontology types it |
| 402,570 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/MolecularComplex"] | the substance's answer, copied onto its flow |
| 402,571 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H7NO2S.H… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/21342 | prefLabel | ef:agent/bootstrap_labels | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v0 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v1 |
| ef:activity/change/20260821T1554374006150000/21343 | name | ef:agent/bootstrap_labels | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v1 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v2 |
| ef:activity/change/20260821T1554374006150000/21344 | synonyms | ef:agent/bootstrap_labels | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v2 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v3 |
| ef:activity/change/20260821T1554374006150000/153104 | context | ef:agent/default_context_mapping | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v3 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v4 |
| ef:activity/change/20260821T1554374006150000/153105 | context_iri | ef:agent/default_context_mapping | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v4 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v5 |
| ef:activity/change/20260821T1554374006150000/220196 | unit_iri | ef:agent/unit_normalization | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v5 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v6 |
| ef:activity/change/20260821T1554374006150000/225924 | prefLabel | ef:agent/normalize_name_case | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v6 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v7 |
| ef:activity/change/20260821T1554374006150000/246716 | properties | ef:agent/enrich_references | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v7 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v8 |
| ef:activity/change/20260821T1554374006150000/246717 | skos_definition | ef:agent/enrich_references | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v8 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v9 |
| ef:activity/change/20260821T1554374006150000/246718 | references | ef:agent/enrich_references | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v9 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v10 |
| ef:activity/change/20260821T1554374006150000/253956 | properties | ef:agent/rdkit_pre_consensus | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v10 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v11 |
| ef:activity/change/20260821T1554374006150000/257077 | altLabel | ef:agent/chebi_altlabels | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v11 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v12 |
| ef:activity/change/20260821T1554374006150000/265505 | altLabel | ef:agent/consensus_match | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v12 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v13 |
| ef:activity/change/20260821T1554374006150000/265506 | cas_match_labels | ef:agent/consensus_match | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v13 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v14 |
| ef:activity/change/20260821T1554374006150000/279146 | properties | ef:agent/opsin_iupac | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v14 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v15 |
| ef:activity/change/20260821T1554374006150000/286000 | properties | ef:agent/rdkit_post_consensus | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v15 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v16 |
| ef:activity/change/20260821T1554374006150000/291448 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v16 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v17 |
| ef:activity/change/20260821T1554374006150000/357575 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v17 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v18 |
| ef:activity/change/20260821T1554374006150000/393535 | properties | ef:agent/normalise_property_values | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v18 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v19 |
| ef:activity/change/20260821T1554374006150000/402570 | types | ef:agent/link_flows_to_their_substance | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v19 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v20 |
| ef:activity/change/20260821T1554374006150000/402571 | properties | ef:agent/link_flows_to_their_substance | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v20 | ef:flow/ad9025d4-6274-43ac-9c95-890439407389/v21 |