Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'Agnique 610G' (trade name), 'NSC 5023' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=methylhexanoate||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-70-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a397a38beb296f84: {'106-70-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['106-70-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_77322']; candidate_pubchem_cids=[7824, 95652]; selected_pubchem_cids=[7824]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
12,550 bootstrap_labels prefLabel [{"@value":"methyl hexanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
12,551 bootstrap_labels name methyl hexanoate Purged legacy name field to enforce prefLabel usage
12,552 bootstrap_labels synonyms ["organic","methylhexanoate","ce-685"] [] Removed legacy synonyms field in favor of structured labels
153,318 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
153,319 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
217,492 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,001 normalize_name_case prefLabel [{"@value":"methyl hexanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Methyl Hexanoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,101 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
239,102 enrich_references skos_definition [{"@value":"A fatty acid methyl ester derived from hexanoic (caproic acid).","@language":"en","provenance":{"prov:wasGe… Merged ChEBI/PubChem definitions into skos:definition
239,103 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J43.566J","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['106-70-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_77322']; candidate_pubchem_cids=[7824, 95652]; selected_pubchem_cids=[7824]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,105 chebi_altlabels altLabel [] [{"@value":"Caproic acid, methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,848 consensus_match altLabel [{"@value":"Caproic acid, methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"Caproic acid, methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=methylhexanoate||dimension=Environmental > media=Water > water_body=Surface water; cas=106-70-7; added Common Chemistry CAS names as altLabel: Agnique 610G, Caproic acid methyl ester, NSC 5023, Pastell M 6; object_uuid=fo-a397a38beb296f84
268,849 consensus_match cas_match_labels {"106-70-7":"exactMatch"} group_key=methylhexanoate||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'106-70-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a397a38beb296f84: {'106-70-7': 'exactMatch'}
276,930 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl Hexanoate'
283,579 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… rdkit_post_consensus from 'CCCCCC(=O)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,844 strip_catalogue_altlabels altLabel [{"@value":"Caproic acid, methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"Caproic acid, methyl ester","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Removed 2 catalogue altLabel value(s): 'Agnique 610G' (trade name), 'NSC 5023' (registry code)
357,682 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/adf078b1-57cf-… associations resolved on the elementary layer
391,287 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H14O2"],… typed the way the ontology types it
399,254 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/12550 prefLabel ef:agent/bootstrap_labels ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v0 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v1
ef:activity/change/20260822T0600486828500000/12551 name ef:agent/bootstrap_labels ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v1 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v2
ef:activity/change/20260822T0600486828500000/12552 synonyms ef:agent/bootstrap_labels ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v2 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v3
ef:activity/change/20260822T0600486828500000/153318 context ef:agent/default_context_mapping ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v3 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v4
ef:activity/change/20260822T0600486828500000/153319 context_iri ef:agent/default_context_mapping ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v4 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v5
ef:activity/change/20260822T0600486828500000/217492 unit_iri ef:agent/unit_normalization ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v5 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v6
ef:activity/change/20260822T0600486828500000/224001 prefLabel ef:agent/normalize_name_case ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v6 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v7
ef:activity/change/20260822T0600486828500000/239101 properties ef:agent/enrich_references ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v7 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v8
ef:activity/change/20260822T0600486828500000/239102 skos_definition ef:agent/enrich_references ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v8 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v9
ef:activity/change/20260822T0600486828500000/239103 references ef:agent/enrich_references ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v9 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v10
ef:activity/change/20260822T0600486828500000/256105 altLabel ef:agent/chebi_altlabels ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v10 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v11
ef:activity/change/20260822T0600486828500000/268848 altLabel ef:agent/consensus_match ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v11 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v12
ef:activity/change/20260822T0600486828500000/268849 cas_match_labels ef:agent/consensus_match ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v12 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v13
ef:activity/change/20260822T0600486828500000/276930 properties ef:agent/opsin_iupac ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v13 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v14
ef:activity/change/20260822T0600486828500000/283579 properties ef:agent/rdkit_post_consensus ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v14 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v15
ef:activity/change/20260822T0600486828500000/289844 altLabel ef:agent/strip_catalogue_altlabels ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v15 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v16
ef:activity/change/20260822T0600486828500000/357682 concept_associations ef:agent/carry_associations_onto_flows ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v16 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v17
ef:activity/change/20260822T0600486828500000/391287 properties ef:agent/normalise_property_values ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v17 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v18
ef:activity/change/20260822T0600486828500000/399254 types ef:agent/link_flows_to_their_substance ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v18 ef:flow/adf078b1-57cf-4837-8229-b9f927c2f261/v19

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