Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 144' (registry code), 'NSC 40929' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=anthranilicacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'118-92-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-331de353c792cd9a: {'118-92-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['118-92-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30754']; candidate_pubchem_cids=[227, 74985, 5459842]; selected_pubchem_cids=[227]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
20,415 bootstrap_labels prefLabel [{"@value":"Anthranilic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Bootstrapped prefLabel from legacy name field
20,416 bootstrap_labels name Anthranilic acid Purged legacy name field to enforce prefLabel usage
24,779 bootstrap_labels synonyms ["2-aminobenzoic acid","anthranilate","vitamin L4"] [] Removed legacy synonyms field in favor of structured labels
154,192 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
154,193 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
213,956 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,718 normalize_name_case prefLabel [{"@value":"Anthranilic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… [{"@value":"Anthranilic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,962 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,963 enrich_references skos_definition [{"@value":"An aminobenzoic acid that is benzoic acid having a single amino substituent located at position 2. It is a… Merged ChEBI/PubChem definitions into skos:definition
228,964 enrich_references references [] [{"@id":"gmelin:3397","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['118-92-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30754']; candidate_pubchem_cids=[227, 74985, 5459842]; selected_pubchem_cids=[227]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,829 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… rdkit_pre_consensus from 'C1=CC=C(C(=C1)C(=O)O)N'; added: monoisotopic_mass
254,594 chebi_altlabels altLabel [] [{"@value":"2-AMINOBENZOIC ACID","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,897 consensus_match altLabel [{"@value":"2-AMINOBENZOIC ACID","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"2-AMINOBENZOIC ACID","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… group_key=anthranilicacid||dimension=Environmental > media=Water > water_body=Ocean; cas=118-92-3; added Common Chemistry CAS names as altLabel: 1-Aminobenzene-2-carboxylic acid, 2-Aminobenzenecarboxylic acid, 2-Carboxyphenylamine, <em>o</em>-Anthranilic acid, Benzoic acid, 2-amino-, NSC 144, NSC 40929, α-Aminobenzoic acid; object_uuid=fo-331de353c792cd9a
263,898 consensus_match cas_match_labels {"118-92-3":"exactMatch"} group_key=anthranilicacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'118-92-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-331de353c792cd9a: {'118-92-3': 'exactMatch'}
273,950 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Anthranilic Acid'
280,350 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… rdkit_post_consensus from 'Nc1ccccc1C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,623 strip_catalogue_altlabels altLabel [{"@value":"2-AMINOBENZOIC ACID","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"2-AMINOBENZOIC ACID","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Removed 2 catalogue altLabel value(s): 'NSC 144' (registry code), 'NSC 40929' (registry code)
358,119 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/af92ae94-16d9-… associations resolved on the elementary layer
388,240 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H7NO2"],… typed the way the ontology types it
394,892 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/20415 prefLabel ef:agent/bootstrap_labels ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v0 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v1
ef:activity/change/20260821T1554374006150000/20416 name ef:agent/bootstrap_labels ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v1 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v2
ef:activity/change/20260821T1554374006150000/24779 synonyms ef:agent/bootstrap_labels ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v2 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v3
ef:activity/change/20260821T1554374006150000/154192 context ef:agent/default_context_mapping ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v3 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v4
ef:activity/change/20260821T1554374006150000/154193 context_iri ef:agent/default_context_mapping ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v4 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v5
ef:activity/change/20260821T1554374006150000/213956 unit_iri ef:agent/unit_normalization ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v5 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v6
ef:activity/change/20260821T1554374006150000/225718 prefLabel ef:agent/normalize_name_case ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v6 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v7
ef:activity/change/20260821T1554374006150000/228962 properties ef:agent/enrich_references ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v7 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v8
ef:activity/change/20260821T1554374006150000/228963 skos_definition ef:agent/enrich_references ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v8 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v9
ef:activity/change/20260821T1554374006150000/228964 references ef:agent/enrich_references ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v9 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v10
ef:activity/change/20260821T1554374006150000/248829 properties ef:agent/rdkit_pre_consensus ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v10 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v11
ef:activity/change/20260821T1554374006150000/254594 altLabel ef:agent/chebi_altlabels ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v11 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v12
ef:activity/change/20260821T1554374006150000/263897 altLabel ef:agent/consensus_match ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v12 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v13
ef:activity/change/20260821T1554374006150000/263898 cas_match_labels ef:agent/consensus_match ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v13 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v14
ef:activity/change/20260821T1554374006150000/273950 properties ef:agent/opsin_iupac ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v14 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v15
ef:activity/change/20260821T1554374006150000/280350 properties ef:agent/rdkit_post_consensus ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v15 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v16
ef:activity/change/20260821T1554374006150000/287623 altLabel ef:agent/strip_catalogue_altlabels ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v16 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v17
ef:activity/change/20260821T1554374006150000/358119 concept_associations ef:agent/carry_associations_onto_flows ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v17 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v18
ef:activity/change/20260821T1554374006150000/388240 properties ef:agent/normalise_property_values ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v18 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v19
ef:activity/change/20260821T1554374006150000/394892 types ef:agent/link_flows_to_their_substance ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v19 ef:flow/af92ae94-16d9-4d12-b94f-55e756bc86df/v20

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