Blasticidin S
Everything that changed this flow. Back to the flow
b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'CID 258' (registry code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=2079-00-7; cc_chebi_agreed_name='Blasticidin S'; object_uuid=fo-47754b38447b2666 |
| cas_match_labels | 1 | consensus_match | group_key=blasticidin-s||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'2079-00-7': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-47754b38447b2666: {'2079-00-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2079-00-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15353']; candidate_pubchem_cids=[258, 16380, 88511, 170012, 356629, 439625, 5745696, 21124837, 38988970, 171042168, 171338130]; selected_pubchem_cids=[170012]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 2,465 | bootstrap_labels | prefLabel | — | [{"@value":"blasticidin-s","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 2,466 | bootstrap_labels | name | blasticidin-s | — | Purged legacy name field to enforce prefLabel usage |
| 24,807 | bootstrap_labels | synonyms | ["3-(3-amino-5-(1-methylguanidino)-1-oxopentylamino-6-(4-amino-2-oxo-2,3-dihydro-pyrimidin-1-yl)-2,3-dihydro-(6h)-pyran… | [] | Removed legacy synonyms field in favor of structured labels |
| 155,040 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 155,041 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 214,167 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,661 | normalize_name_case | prefLabel | [{"@value":"blasticidin-s","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Blasticidin-s","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 229,558 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,559 | enrich_references | skos_definition | — | [{"@value":"A blasticidin that is an antibiotic obtained from Streptomyces griseochromogene.","@language":"en","provena… | Merged ChEBI/PubChem definitions into skos:definition |
| 229,560 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J9.250I","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['2079-00-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15353']; candidate_pubchem_cids=[258, 16380, 88511, 170012, 356629, 439625, 5745696, 21124837, 38988970, 171042168, 171338130]; selected_pubchem_cids=[170012]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,009 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | rdkit_pre_consensus from 'CN(CCC(CC(=O)NC1C=CC(OC1C(=O)O)N2C=CC(=NC2=O)N)N)C(=N)N'; added: inchi2d_string, monoisotopic_mass |
| 254,661 | chebi_altlabels | altLabel | [] | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 264,440 | consensus_match | prefLabel | [{"@value":"Blasticidin-s","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Blasticidin S","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"c… | cas=2079-00-7; cc_chebi_agreed_name='Blasticidin S'; object_uuid=fo-47754b38447b2666 |
| 264,441 | consensus_match | altLabel | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | cas=2079-00-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-47754b38447b2666 |
| 264,442 | consensus_match | altLabel | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | group_key=blasticidin-s||dimension=Environmental > media=Ground > geography=Agricultural; cas=2079-00-7; added Common Chemistry CAS names as altLabel: 4-[[(3<em>S</em>)-3-Amino-5-[(aminoiminomethyl)methylamino]-1-oxopentyl]amino]-1-(4-amino-2-oxo-1(2<em>H</em>)-pyrimidinyl)-1,2,3,4-tetradeoxy-β-<span class="text-smallcaps">D</span>-<em>erythro</em>-hex-2-enopyranuronic acid, <span class="text-smallcaps">D</span>-<em>erythro</em>-Hex-2-enopyranuronic acid, 4-[3-amino-5-(1-methylguanidino)valeramido]-1-(4-amino-2-oxo-1(2<em>H</em>)-pyrimidinyl)-1,2,3,4-tetradeoxy-, Bla-S, CID 258, Pubchem CID: 258, β-<span class="text-smallcaps">D</span>-<em>erythro</em>-Hex-2-enopyranuronic acid, 4-[[(3<em>S</em>)-3-amino-5-[(aminoiminomethyl)methylamino]-1-oxopentyl]amino]-1-(4-amino-2-oxo-1(2<em>H</em>)-pyrimidinyl)-1,2,3,4-tetradeoxy-; object_uuid=fo-47754b38447b2666 |
| 264,443 | consensus_match | cas_match_labels | — | {"2079-00-7":"exactMatch"} | group_key=blasticidin-s||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'2079-00-7': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-47754b38447b2666: {'2079-00-7': 'exactMatch'} |
| 280,556 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | rdkit_post_consensus from 'CN(CCC(CC(=O)NC1C=CC(OC1C(=O)O)N2C=CC(=NC2=O)N)N)C(=N)N'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,758 | strip_catalogue_altlabels | altLabel | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | [{"@value":"4-amino-1-(4-{[(3S)-3-amino-5-(N-methylcarbamimidamido)pentanoyl]amino}-2,3,4-trideoxy-beta-D-erythro-hex-2… | Removed 1 catalogue altLabel value(s): 'CID 258' (registry code) |
| 358,564 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b0df0d7b-87b1-… | associations resolved on the elementary layer |
| 388,436 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | typed the way the ontology types it |
| 395,157 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 395,158 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24127","rdfs:label":"fungicide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
| 395,159 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C17H26N8O5… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/2465 | prefLabel | ef:agent/bootstrap_labels | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v0 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v1 |
| ef:activity/change/20260820T1416470405690000/2466 | name | ef:agent/bootstrap_labels | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v1 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v2 |
| ef:activity/change/20260820T1416470405690000/24807 | synonyms | ef:agent/bootstrap_labels | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v2 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v3 |
| ef:activity/change/20260820T1416470405690000/155040 | context | ef:agent/default_context_mapping | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v3 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v4 |
| ef:activity/change/20260820T1416470405690000/155041 | context_iri | ef:agent/default_context_mapping | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v4 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v5 |
| ef:activity/change/20260820T1416470405690000/214167 | unit_iri | ef:agent/unit_normalization | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v5 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v6 |
| ef:activity/change/20260820T1416470405690000/221661 | prefLabel | ef:agent/normalize_name_case | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v6 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v7 |
| ef:activity/change/20260820T1416470405690000/229558 | properties | ef:agent/enrich_references | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v7 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v8 |
| ef:activity/change/20260820T1416470405690000/229559 | skos_definition | ef:agent/enrich_references | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v8 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v9 |
| ef:activity/change/20260820T1416470405690000/229560 | references | ef:agent/enrich_references | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v9 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v10 |
| ef:activity/change/20260820T1416470405690000/249009 | properties | ef:agent/rdkit_pre_consensus | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v10 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v11 |
| ef:activity/change/20260820T1416470405690000/254661 | altLabel | ef:agent/chebi_altlabels | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v11 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v12 |
| ef:activity/change/20260820T1416470405690000/264440 | prefLabel | ef:agent/consensus_match | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v12 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v13 |
| ef:activity/change/20260820T1416470405690000/264441 | altLabel | ef:agent/consensus_match | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v13 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v14 |
| ef:activity/change/20260820T1416470405690000/264442 | altLabel | ef:agent/consensus_match | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v14 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v15 |
| ef:activity/change/20260820T1416470405690000/264443 | cas_match_labels | ef:agent/consensus_match | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v15 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v16 |
| ef:activity/change/20260820T1416470405690000/280556 | properties | ef:agent/rdkit_post_consensus | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v16 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v17 |
| ef:activity/change/20260820T1416470405690000/287758 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v17 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v18 |
| ef:activity/change/20260820T1416470405690000/358564 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v18 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v19 |
| ef:activity/change/20260820T1416470405690000/388436 | properties | ef:agent/normalise_property_values | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v19 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v20 |
| ef:activity/change/20260820T1416470405690000/395157 | types | ef:agent/link_flows_to_their_substance | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v20 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v21 |
| ef:activity/change/20260820T1416470405690000/395158 | roles | ef:agent/link_flows_to_their_substance | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v21 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v22 |
| ef:activity/change/20260820T1416470405690000/395159 | properties | ef:agent/link_flows_to_their_substance | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v22 | ef:flow/b0df0d7b-87b1-4fe5-aafb-67d35d9fc1a9/v23 |