3-chlorobiphenyl
Everything that changed this flow. Back to the flow
b14219b4-63fc-4df1-bd5e-043488416a53
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | chebi_altlabels, consensus_match | group_key=3-chlorobiphenyl||dimension=Environmental > media=Water > water_body=Long-term; cas=2051-61-8; added Common Chemistry CAS names as altLabel: 1,1′-Biphenyl, 3-chloro-, 1-Chloro-3-phenylbenzene, 3-Chloro-1,1′-biphenyl, Biphenyl, 3-chloro-, PCB 2; object_uuid=fo-f650b57f99812c0b |
| cas_match_labels | 1 | consensus_match | group_key=3-chlorobiphenyl||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'2051-61-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-f650b57f99812c0b: {'2051-61-8': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| prefLabel | 1 | bootstrap_labels | Bootstrapped prefLabel from legacy name field |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2051-61-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36716']; candidate_pubchem_cids=[16322]; selected_pubchem_cids=[16322]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
18| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,489 | bootstrap_labels | prefLabel | — | [{"@value":"3-chlorobiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 1,490 | bootstrap_labels | name | 3-chlorobiphenyl | — | Purged legacy name field to enforce prefLabel usage |
| 1,491 | bootstrap_labels | synonyms | ["1,1'-Biphenyl, 2-chloro- (9CI)","1,1'-Biphenyl, 3-chloro-","1-chloro-3-phenylbenzene","3-Chlorbiphenyl","3-Chloro-1,1… | [] | Removed legacy synonyms field in favor of structured labels |
| 155,258 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 155,259 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 213,832 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 228,608 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 228,609 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 228,610 | enrich_references | references | [] | [{"@id":"beilstein:1863135","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['2051-61-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36716']; candidate_pubchem_cids=[16322]; selected_pubchem_cids=[16322]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,727 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | rdkit_pre_consensus from 'C1=CC=C(C=C1)C2=CC(=CC=C2)Cl'; added: monoisotopic_mass |
| 254,552 | chebi_altlabels | altLabel | [] | [{"@value":"3-Chlorbiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 261,968 | consensus_match | altLabel | [{"@value":"3-Chlorbiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"3-Chlorbiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | group_key=3-chlorobiphenyl||dimension=Environmental > media=Water > water_body=Long-term; cas=2051-61-8; added Common Chemistry CAS names as altLabel: 1,1′-Biphenyl, 3-chloro-, 1-Chloro-3-phenylbenzene, 3-Chloro-1,1′-biphenyl, Biphenyl, 3-chloro-, PCB 2; object_uuid=fo-f650b57f99812c0b |
| 261,969 | consensus_match | cas_match_labels | — | {"2051-61-8":"exactMatch"} | group_key=3-chlorobiphenyl||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'2051-61-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-f650b57f99812c0b: {'2051-61-8': 'exactMatch'} |
| 273,848 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-chlorobiphenyl' |
| 280,240 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | rdkit_post_consensus from 'Clc1cccc(-c2ccccc2)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 358,653 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b14219b4-63fc-… | associations resolved on the elementary layer |
| 388,137 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H9Cl"],… | typed the way the ontology types it |
| 394,751 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
18 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/1489 | prefLabel | ef:agent/bootstrap_labels | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v0 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v1 |
| ef:activity/change/20260821T1554374006150000/1490 | name | ef:agent/bootstrap_labels | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v1 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v2 |
| ef:activity/change/20260821T1554374006150000/1491 | synonyms | ef:agent/bootstrap_labels | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v2 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v3 |
| ef:activity/change/20260821T1554374006150000/155258 | context | ef:agent/default_context_mapping | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v3 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v4 |
| ef:activity/change/20260821T1554374006150000/155259 | context_iri | ef:agent/default_context_mapping | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v4 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v5 |
| ef:activity/change/20260821T1554374006150000/213832 | unit_iri | ef:agent/unit_normalization | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v5 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v6 |
| ef:activity/change/20260821T1554374006150000/228608 | properties | ef:agent/enrich_references | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v6 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v7 |
| ef:activity/change/20260821T1554374006150000/228609 | skos_definition | ef:agent/enrich_references | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v7 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v8 |
| ef:activity/change/20260821T1554374006150000/228610 | references | ef:agent/enrich_references | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v8 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v9 |
| ef:activity/change/20260821T1554374006150000/248727 | properties | ef:agent/rdkit_pre_consensus | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v9 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v10 |
| ef:activity/change/20260821T1554374006150000/254552 | altLabel | ef:agent/chebi_altlabels | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v10 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v11 |
| ef:activity/change/20260821T1554374006150000/261968 | altLabel | ef:agent/consensus_match | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v11 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v12 |
| ef:activity/change/20260821T1554374006150000/261969 | cas_match_labels | ef:agent/consensus_match | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v12 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v13 |
| ef:activity/change/20260821T1554374006150000/273848 | properties | ef:agent/opsin_iupac | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v13 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v14 |
| ef:activity/change/20260821T1554374006150000/280240 | properties | ef:agent/rdkit_post_consensus | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v14 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v15 |
| ef:activity/change/20260821T1554374006150000/358653 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v15 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v16 |
| ef:activity/change/20260821T1554374006150000/388137 | properties | ef:agent/normalise_property_values | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v16 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v17 |
| ef:activity/change/20260821T1554374006150000/394751 | types | ef:agent/link_flows_to_their_substance | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v17 | ef:flow/b14219b4-63fc-4df1-bd5e-043488416a53/v18 |