Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'CB 1348' (grade code), 'NCI 3088' (grade code), 'NSC 3088' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=chlorambucil||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'305-03-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a591b843b5534cb7: {'305-03-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['305-03-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28830']; candidate_pubchem_cids=[2708, 238870, 46705346]; selected_pubchem_cids=[2708]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
22,869 bootstrap_labels prefLabel [{"@value":"chlorambucil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Bootstrapped prefLabel from legacy name field
22,870 bootstrap_labels name chlorambucil Purged legacy name field to enforce prefLabel usage
23,135 bootstrap_labels synonyms [".gamma.-(p-bis(2-chloroethyl)aminophenyl)butyric acid",".gamma.-[p-Di(2-chloroethyl)aminophenyl]butyric acid",".gamma… [] Removed legacy synonyms field in favor of structured labels
156,680 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
156,681 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term)
220,581 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,226 normalize_name_case prefLabel [{"@value":"chlorambucil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… [{"@value":"Chlorambucil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"c… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,740 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,741 enrich_references skos_definition [{"@value":"A monocarboxylic acid that is butanoic acid substituted at position 4 by a 4-[bis(2-chloroethyl)amino]pheny… Merged ChEBI/PubChem definitions into skos:definition
247,742 enrich_references references [] [{"@id":"drugcentral:588","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['305-03-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28830']; candidate_pubchem_cids=[2708, 238870, 46705346]; selected_pubchem_cids=[2708]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,249 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… rdkit_pre_consensus from 'C1=CC(=CC=C1CCCC(=O)O)N(CCCl)CCCl'; added: monoisotopic_mass
257,279 chebi_altlabels altLabel [] [{"@value":"4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,003 consensus_match altLabel [{"@value":"4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi… [{"@value":"4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi… group_key=chlorambucil||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=305-03-3; added Common Chemistry CAS names as altLabel: 4-[4-[Bis(2-chloroethyl)amino]phenyl]butanoic acid, 4-[Bis(2-chloroethyl)amino]benzenebutanoic acid, Amboclorin, Benzenebutanoic acid, 4-[bis(2-chloroethyl)amino]-, Butyric acid, 4-[<em>p</em>-[bis(2-chloroethyl)amino]phenyl]-, CB 1348, Chloraminophene, Chlorbutin, Chlorobutine, Ecloril, Leukeran Tablets, Linfolizin, Linfolysin, Lympholysin, MeSH ID: D002699, NCI 3088, NSC 3088, γ-[<em>p</em>-Bis(2-chloroethyl)aminophenyl]butyric acid, γ-[<em>p</em>-Di(2-chloroethyl)aminophenyl]butyric acid; object_uuid=fo-a591b843b5534cb7
265,004 consensus_match cas_match_labels {"305-03-3":"exactMatch"} group_key=chlorambucil||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'305-03-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a591b843b5534cb7: {'305-03-3': 'exactMatch'}
279,477 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid'
286,354 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… rdkit_post_consensus from 'O=C(O)CCCc1ccc(N(CCCl)CCCl)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,697 strip_catalogue_altlabels altLabel [{"@value":"4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi… [{"@value":"4-(p-bis(beta-chloroethyl)aminophenyl)butyric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi… Removed 3 catalogue altLabel value(s): 'CB 1348' (grade code), 'NCI 3088' (grade code), 'NSC 3088' (registry code)
359,365 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b3f136f7-43f3-… associations resolved on the elementary layer
393,871 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C14H19Cl2N… typed the way the ontology types it
403,077 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/22869 prefLabel ef:agent/bootstrap_labels ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v0 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v1
ef:activity/change/20260822T0600486828500000/22870 name ef:agent/bootstrap_labels ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v1 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v2
ef:activity/change/20260822T0600486828500000/23135 synonyms ef:agent/bootstrap_labels ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v2 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v3
ef:activity/change/20260822T0600486828500000/156680 context ef:agent/default_context_mapping ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v3 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v4
ef:activity/change/20260822T0600486828500000/156681 context_iri ef:agent/default_context_mapping ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v4 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v5
ef:activity/change/20260822T0600486828500000/220581 unit_iri ef:agent/unit_normalization ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v5 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v6
ef:activity/change/20260822T0600486828500000/226226 prefLabel ef:agent/normalize_name_case ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v6 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v7
ef:activity/change/20260822T0600486828500000/247740 properties ef:agent/enrich_references ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v7 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v8
ef:activity/change/20260822T0600486828500000/247741 skos_definition ef:agent/enrich_references ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v8 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v9
ef:activity/change/20260822T0600486828500000/247742 references ef:agent/enrich_references ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v9 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v10
ef:activity/change/20260822T0600486828500000/254249 properties ef:agent/rdkit_pre_consensus ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v10 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v11
ef:activity/change/20260822T0600486828500000/257279 altLabel ef:agent/chebi_altlabels ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v11 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v12
ef:activity/change/20260822T0600486828500000/265003 altLabel ef:agent/consensus_match ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v12 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v13
ef:activity/change/20260822T0600486828500000/265004 cas_match_labels ef:agent/consensus_match ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v13 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v14
ef:activity/change/20260822T0600486828500000/279477 properties ef:agent/opsin_iupac ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v14 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v15
ef:activity/change/20260822T0600486828500000/286354 properties ef:agent/rdkit_post_consensus ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v15 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v16
ef:activity/change/20260822T0600486828500000/291697 altLabel ef:agent/strip_catalogue_altlabels ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v16 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v17
ef:activity/change/20260822T0600486828500000/359365 concept_associations ef:agent/carry_associations_onto_flows ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v17 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v18
ef:activity/change/20260822T0600486828500000/393871 properties ef:agent/normalise_property_values ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v18 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v19
ef:activity/change/20260822T0600486828500000/403077 types ef:agent/link_flows_to_their_substance ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v19 ef:flow/b3f136f7-43f3-4bee-ab83-fc1435b45248/v20

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