Brightway Flows 1.0
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By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 407823' (registry code)
cas_match_labels 1 consensus_match group_key=2,3,5,6-tetrachlorophenol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'935-95-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3ac736b8f96aa2d8: {'935-95-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['935-95-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_52048']; candidate_pubchem_cids=[13636]; selected_pubchem_cids=[13636]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
18,325 bootstrap_labels prefLabel — [{"@value":"2,3,5,6-tetrachlorophenol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAtt… Bootstrapped prefLabel from legacy name field
18,326 bootstrap_labels name 2,3,5,6-tetrachlorophenol — Purged legacy name field to enforce prefLabel usage
18,327 bootstrap_labels synonyms ["2,3,5,6-Tetrachloro phenol","2,3,5,6-Tetrachlorophenate","AC1L225I","KEWNKZNZRIAIAK-UHFFFAOYSA-","Phenol, 2,3,5,6-tet… [] Removed legacy synonyms field in favor of structured labels
157,005 default_context_mapping context — {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
157,006 default_context_mapping context_iri — https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,334 unit_normalization unit_iri — https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
244,319 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,320 enrich_references skos_definition — [{"@value":"The 2,3,5,6-isomer of tetrachlorophenol","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_refer… Merged ChEBI/PubChem definitions into skos:definition
244,321 enrich_references references [] [{"@id":"beilstein:2049586","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['935-95-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_52048']; candidate_pubchem_cids=[13636]; selected_pubchem_cids=[13636]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
253,261 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… rdkit_pre_consensus from 'C1=C(C(=C(C(=C1Cl)Cl)O)Cl)Cl'; added: monoisotopic_mass
256,796 chebi_altlabels altLabel [] [{"@value":"2,3,5,6-TeCP","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"br… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,728 consensus_match altLabel [{"@value":"2,3,5,6-TeCP","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"br… [{"@value":"2,3,5,6-TeCP","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"br… group_key=2,3,5,6-tetrachlorophenol||dimension=Environmental > media=Air > strata=Unknown; cas=935-95-5; added Common Chemistry CAS names as altLabel: NSC 407823, Phenol, 2,3,5,6-tetrachloro-; object_uuid=fo-3ac736b8f96aa2d8
259,729 consensus_match cas_match_labels — {"935-95-5":"exactMatch"} group_key=2,3,5,6-tetrachlorophenol||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'935-95-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3ac736b8f96aa2d8: {'935-95-5': 'exactMatch'}
278,472 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,3,5,6-tetrachlorophenol'
285,236 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… rdkit_post_consensus from 'Oc1c(Cl)c(Cl)cc(Cl)c1Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,961 strip_catalogue_altlabels altLabel [{"@value":"2,3,5,6-TeCP","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"br… [{"@value":"2,3,5,6-TeCP","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"br… Removed 1 catalogue altLabel value(s): 'NSC 407823' (registry code)
359,560 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b4827053-6ed6-… associations resolved on the elementary layer
392,865 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H2Cl4O"]… typed the way the ontology types it
401,517 link_flows_to_their_substance types — ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20261019T0712047113160000/18325 prefLabel ef:agent/bootstrap_labels ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v0 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v1
ef:activity/change/20261019T0712047113160000/18326 name ef:agent/bootstrap_labels ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v1 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v2
ef:activity/change/20261019T0712047113160000/18327 synonyms ef:agent/bootstrap_labels ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v2 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v3
ef:activity/change/20261019T0712047113160000/157005 context ef:agent/default_context_mapping ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v3 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v4
ef:activity/change/20261019T0712047113160000/157006 context_iri ef:agent/default_context_mapping ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v4 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v5
ef:activity/change/20261019T0712047113160000/219334 unit_iri ef:agent/unit_normalization ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v5 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v6
ef:activity/change/20261019T0712047113160000/244319 properties ef:agent/enrich_references ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v6 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v7
ef:activity/change/20261019T0712047113160000/244320 skos_definition ef:agent/enrich_references ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v7 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v8
ef:activity/change/20261019T0712047113160000/244321 references ef:agent/enrich_references ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v8 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v9
ef:activity/change/20261019T0712047113160000/253261 properties ef:agent/rdkit_pre_consensus ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v9 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v10
ef:activity/change/20261019T0712047113160000/256796 altLabel ef:agent/chebi_altlabels ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v10 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v11
ef:activity/change/20261019T0712047113160000/259728 altLabel ef:agent/consensus_match ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v11 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v12
ef:activity/change/20261019T0712047113160000/259729 cas_match_labels ef:agent/consensus_match ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v12 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v13
ef:activity/change/20261019T0712047113160000/278472 properties ef:agent/opsin_iupac ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v13 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v14
ef:activity/change/20261019T0712047113160000/285236 properties ef:agent/rdkit_post_consensus ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v14 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v15
ef:activity/change/20261019T0712047113160000/290961 altLabel ef:agent/strip_catalogue_altlabels ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v15 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v16
ef:activity/change/20261019T0712047113160000/359560 concept_associations ef:agent/carry_associations_onto_flows ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v16 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v17
ef:activity/change/20261019T0712047113160000/392865 properties ef:agent/normalise_property_values ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v17 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v18
ef:activity/change/20261019T0712047113160000/401517 types ef:agent/link_flows_to_their_substance ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v18 ef:flow/b4827053-6ed6-4c87-babd-cfda9b9367ed/v19

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