Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=selenousacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7783-00-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ec2d793420c63bb: {'7783-00-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7783-00-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_26642']; candidate_pubchem_cids=[1091, 18762062]; selected_pubchem_cids=[1091]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
17,121 bootstrap_labels prefLabel [{"@value":"selenous acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Bootstrapped prefLabel from legacy name field
17,122 bootstrap_labels name selenous acid Purged legacy name field to enforce prefLabel usage
17,123 bootstrap_labels synonyms ["inorganic","seleniousacid"] [] Removed legacy synonyms field in favor of structured labels
157,278 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
157,279 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
218,951 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,009 normalize_name_case prefLabel [{"@value":"selenous acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Selenous Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
243,244 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
243,245 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
243,246 enrich_references references [] [{"@id":"gmelin:25856","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['7783-00-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_26642']; candidate_pubchem_cids=[1091, 18762062]; selected_pubchem_cids=[1091]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,943 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… rdkit_pre_consensus from 'O=[Se](O)O'; added: monoisotopic_mass
256,636 chebi_altlabels altLabel [] [{"@value":"[SeO(OH)2]","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,596 consensus_match altLabel [{"@value":"[SeO(OH)2]","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… [{"@value":"[SeO(OH)2]","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… group_key=selenousacid||dimension=Environmental > media=Water > water_body=Surface water; cas=7783-00-8; added Common Chemistry CAS names as altLabel: MeSH ID: D020887, Micro Se, Monohydrated selenium dioxide, Selenious acid (H<sub>2</sub>SeO<sub>3</sub>), Selenium hydroxide oxide (Se(OH)<sub>2</sub>O); object_uuid=fo-0ec2d793420c63bb
271,597 consensus_match cas_match_labels {"7783-00-8":"exactMatch"} group_key=selenousacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7783-00-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ec2d793420c63bb: {'7783-00-8': 'exactMatch'}
278,146 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Selenous Acid'
284,886 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… rdkit_post_consensus from 'O=[Se](O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,913 dedupe_altlabels altLabel [{"@value":"[SeO(OH)2]","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… [{"@value":"[SeO(OH)2]","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"cons… Deduplicated altLabel values and removed entries matching prefLabel
359,664 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b4f5245f-1c92-… associations resolved on the elementary layer
392,503 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["H2O3Se"],"… typed the way the ontology types it
401,007 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/17121 prefLabel ef:agent/bootstrap_labels ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v0 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v1
ef:activity/change/20260821T1302361922970000/17122 name ef:agent/bootstrap_labels ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v1 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v2
ef:activity/change/20260821T1302361922970000/17123 synonyms ef:agent/bootstrap_labels ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v2 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v3
ef:activity/change/20260821T1302361922970000/157278 context ef:agent/default_context_mapping ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v3 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v4
ef:activity/change/20260821T1302361922970000/157279 context_iri ef:agent/default_context_mapping ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v4 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v5
ef:activity/change/20260821T1302361922970000/218951 unit_iri ef:agent/unit_normalization ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v5 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v6
ef:activity/change/20260821T1302361922970000/225009 prefLabel ef:agent/normalize_name_case ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v6 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v7
ef:activity/change/20260821T1302361922970000/243244 properties ef:agent/enrich_references ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v7 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v8
ef:activity/change/20260821T1302361922970000/243245 skos_definition ef:agent/enrich_references ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v8 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v9
ef:activity/change/20260821T1302361922970000/243246 references ef:agent/enrich_references ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v9 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v10
ef:activity/change/20260821T1302361922970000/252943 properties ef:agent/rdkit_pre_consensus ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v10 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v11
ef:activity/change/20260821T1302361922970000/256636 altLabel ef:agent/chebi_altlabels ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v11 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v12
ef:activity/change/20260821T1302361922970000/271596 altLabel ef:agent/consensus_match ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v12 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v13
ef:activity/change/20260821T1302361922970000/271597 cas_match_labels ef:agent/consensus_match ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v13 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v14
ef:activity/change/20260821T1302361922970000/278146 properties ef:agent/opsin_iupac ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v14 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v15
ef:activity/change/20260821T1302361922970000/284886 properties ef:agent/rdkit_post_consensus ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v15 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v16
ef:activity/change/20260821T1302361922970000/292913 altLabel ef:agent/dedupe_altlabels ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v16 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v17
ef:activity/change/20260821T1302361922970000/359664 concept_associations ef:agent/carry_associations_onto_flows ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v17 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v18
ef:activity/change/20260821T1302361922970000/392503 properties ef:agent/normalise_property_values ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v18 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v19
ef:activity/change/20260821T1302361922970000/401007 types ef:agent/link_flows_to_their_substance ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v19 ef:flow/b4f5245f-1c92-452c-b104-bef2b83156b1/v20

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