3-hydroxy-7-oxocholan-24-oic Acid
Everything that changed this flow. Back to the flow
b6ea3752-2eac-4212-900d-c4adfcffc445
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 226118' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=3-hydroxy-7-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'4651-67-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-360630725f8ed4a0: {'4651-67-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['4651-67-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82679']; candidate_pubchem_cids=[313030, 444262, 12899643, 126963552, 133109212, 134694240, 145714623, 154790155, 170923462]; selected_pubchem_cids=[444262]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 2,987 | bootstrap_labels | prefLabel | — | [{"@value":"3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… | Bootstrapped prefLabel from legacy name field |
| 2,988 | bootstrap_labels | name | 3-hydroxy-7-oxocholan-24-oic acid | — | Purged legacy name field to enforce prefLabel usage |
| 2,989 | bootstrap_labels | synonyms | ["3-î±-hydroxy-7-oxo-5-î²-cholan-24-oicacid","3-hydroxy-7-oxocholan-24-oicacid","3î±-hydroxy-7-oxo-5î²-cholanicacid","7… | [] | Removed legacy synonyms field in favor of structured labels |
| 158,390 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 158,391 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 214,336 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,772 | normalize_name_case | prefLabel | [{"@value":"3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… | [{"@value":"3-hydroxy-7-oxocholan-24-oic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","pro… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 230,048 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 230,049 | enrich_references | skos_definition | — | [{"@value":"A bile acid that is lithocholic acid carrying an additional oxo substituent at position 7.","@language":"en… | Merged ChEBI/PubChem definitions into skos:definition |
| 230,050 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J297.868G","provenance":{"prov:wasGeneratedBy":"enrich_referen… | Added references with provenance; cas_numbers=['4651-67-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82679']; candidate_pubchem_cids=[313030, 444262, 12899643, 126963552, 133109212, 134694240, 145714623, 154790155, 170923462]; selected_pubchem_cids=[444262]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,144 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | rdkit_pre_consensus from 'CC(CCC(=O)O)C1CCC2C1(CCC3C2C(=O)CC4C3(CCC(C4)O)C)C'; added: inchi2d_string |
| 254,717 | chebi_altlabels | altLabel | [] | [{"@value":"(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_a… | Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 262,030 | consensus_match | altLabel | [{"@value":"(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_a… | [{"@value":"(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_a… | group_key=3-hydroxy-7-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=4651-67-6; added Common Chemistry CAS names as altLabel: (3α,5β)-3-Hydroxy-7-oxocholan-24-oic acid, 3α-Hydroxy-7-<em>keto</em>-5β-cholan-24-oic acid, 3α-Hydroxy-7-<em>keto</em>-5β-cholanic acid, 3α-Hydroxy-7-oxo-5β-cholan-24-oic acid, 3α-Hydroxy-7-oxo-5β-cholanic acid, 3α-Hydroxy-7-oxo-5β-cholanoic acid, 3α-Hydroxy-7-oxo-5β-cholic acid, 5β-Cholan-24-oic acid, 3α-hydroxy-7-oxo-, 5β-Cholanic acid, 3α-hydroxy-7-oxo-, 5β-Cholanic acid-3α-ol-7-one, 7-<em>keto</em>-Lithocholic acid, 7-Ketochenodeoxycholic acid, 7-Oxo-3α-hydroxycholan-24-oic acid, 7K-LCA, <em>keto</em>-Lithocholic acid, Cholan-24-oic acid, 3-hydroxy-7-oxo-, (3α,5β)-, NSC 226118; object_uuid=fo-360630725f8ed4a0 |
| 262,031 | consensus_match | cas_match_labels | — | {"4651-67-6":"exactMatch"} | group_key=3-hydroxy-7-oxocholan-24-oicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'4651-67-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-360630725f8ed4a0: {'4651-67-6': 'exactMatch'} |
| 274,260 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid' |
| 280,689 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | rdkit_post_consensus from 'C[C@H](CCC(=O)O)[C@H]1CC[C@H]2[C@@H]3C(=O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,840 | strip_catalogue_altlabels | altLabel | [{"@value":"(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_a… | [{"@value":"(3alpha,5beta)-3-hydroxy-7-oxocholan-24-oic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_a… | Removed 1 catalogue altLabel value(s): 'NSC 226118' (registry code) |
| 360,219 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b6ea3752-2eac-… | associations resolved on the elementary layer |
| 388,556 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | typed the way the ontology types it |
| 395,344 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 395,345 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C24H38O4"]… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/2987 | prefLabel | ef:agent/bootstrap_labels | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v0 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v1 |
| ef:activity/change/20260821T1554374006150000/2988 | name | ef:agent/bootstrap_labels | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v1 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v2 |
| ef:activity/change/20260821T1554374006150000/2989 | synonyms | ef:agent/bootstrap_labels | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v2 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v3 |
| ef:activity/change/20260821T1554374006150000/158390 | context | ef:agent/default_context_mapping | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v3 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v4 |
| ef:activity/change/20260821T1554374006150000/158391 | context_iri | ef:agent/default_context_mapping | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v4 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v5 |
| ef:activity/change/20260821T1554374006150000/214336 | unit_iri | ef:agent/unit_normalization | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v5 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v6 |
| ef:activity/change/20260821T1554374006150000/221772 | prefLabel | ef:agent/normalize_name_case | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v6 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v7 |
| ef:activity/change/20260821T1554374006150000/230048 | properties | ef:agent/enrich_references | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v7 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v8 |
| ef:activity/change/20260821T1554374006150000/230049 | skos_definition | ef:agent/enrich_references | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v8 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v9 |
| ef:activity/change/20260821T1554374006150000/230050 | references | ef:agent/enrich_references | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v9 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v10 |
| ef:activity/change/20260821T1554374006150000/249144 | properties | ef:agent/rdkit_pre_consensus | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v10 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v11 |
| ef:activity/change/20260821T1554374006150000/254717 | altLabel | ef:agent/chebi_altlabels | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v11 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v12 |
| ef:activity/change/20260821T1554374006150000/262030 | altLabel | ef:agent/consensus_match | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v12 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v13 |
| ef:activity/change/20260821T1554374006150000/262031 | cas_match_labels | ef:agent/consensus_match | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v13 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v14 |
| ef:activity/change/20260821T1554374006150000/274260 | properties | ef:agent/opsin_iupac | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v14 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v15 |
| ef:activity/change/20260821T1554374006150000/280689 | properties | ef:agent/rdkit_post_consensus | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v15 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v16 |
| ef:activity/change/20260821T1554374006150000/287840 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v16 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v17 |
| ef:activity/change/20260821T1554374006150000/360219 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v17 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v18 |
| ef:activity/change/20260821T1554374006150000/388556 | properties | ef:agent/normalise_property_values | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v18 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v19 |
| ef:activity/change/20260821T1554374006150000/395344 | types | ef:agent/link_flows_to_their_substance | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v19 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v20 |
| ef:activity/change/20260821T1554374006150000/395345 | properties | ef:agent/link_flows_to_their_substance | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v20 | ef:flow/b6ea3752-2eac-4212-900d-c4adfcffc445/v21 |