Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 89248' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=azulene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'275-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4be4dd22ff214344: {'275-51-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['275-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_31249']; candidate_pubchem_cids=[9231]; selected_pubchem_cids=[9231]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,746 bootstrap_labels prefLabel [{"@value":"azulene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Bootstrapped prefLabel from legacy name field
10,747 bootstrap_labels name azulene Purged legacy name field to enforce prefLabel usage
10,748 bootstrap_labels synonyms ["A0634","AC1L1SM7","AZULENE, M.P. 99 C","Azotesin","Azulekeep","Azunamic","Bicyclo(5.3.0)-1,3,5,7,9-decapentaene","Bic… [] Removed legacy synonyms field in favor of structured labels
158,414 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
158,415 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,902 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,603 normalize_name_case prefLabel [{"@value":"azulene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… [{"@value":"Azulene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
237,410 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,411 enrich_references skos_definition [{"@value":"A mancude carbobicyclic parent consisting of a cycloheptatriene and cyclopentadiene rings.","@language":"en… Merged ChEBI/PubChem definitions into skos:definition
237,412 enrich_references references [] [{"@id":"gmelin:102129","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… Added references with provenance; cas_numbers=['275-51-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_31249']; candidate_pubchem_cids=[9231]; selected_pubchem_cids=[9231]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,894 chebi_altlabels altLabel [] [{"@value":"Azulen","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,989 consensus_match altLabel [{"@value":"Azulen","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Azulen","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… group_key=azulene||dimension=Environmental > media=Ground > geography=Agricultural; cas=275-51-4; added Common Chemistry CAS names as altLabel: Bicyclo[5.3.0]decapentaene, NSC 89248; object_uuid=fo-4be4dd22ff214344
263,990 consensus_match cas_match_labels {"275-51-4":"exactMatch"} group_key=azulene||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'275-51-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-4be4dd22ff214344: {'275-51-4': 'exactMatch'}
276,436 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Azulene'
283,041 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… rdkit_post_consensus from 'c1ccc2cccc-2cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,486 strip_catalogue_altlabels altLabel [{"@value":"Azulen","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… [{"@value":"Azulen","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… Removed 1 catalogue altLabel value(s): 'NSC 89248' (registry code)
360,231 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b6f2aea3-4e3a-… associations resolved on the elementary layer
390,791 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H8"],"a… typed the way the ontology types it
398,561 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/10746 prefLabel ef:agent/bootstrap_labels ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v0 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v1
ef:activity/change/20260821T1554374006150000/10747 name ef:agent/bootstrap_labels ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v1 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v2
ef:activity/change/20260821T1554374006150000/10748 synonyms ef:agent/bootstrap_labels ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v2 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v3
ef:activity/change/20260821T1554374006150000/158414 context ef:agent/default_context_mapping ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v3 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v4
ef:activity/change/20260821T1554374006150000/158415 context_iri ef:agent/default_context_mapping ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v4 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v5
ef:activity/change/20260821T1554374006150000/216902 unit_iri ef:agent/unit_normalization ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v5 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v6
ef:activity/change/20260821T1554374006150000/223603 prefLabel ef:agent/normalize_name_case ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v6 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v7
ef:activity/change/20260821T1554374006150000/237410 properties ef:agent/enrich_references ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v7 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v8
ef:activity/change/20260821T1554374006150000/237411 skos_definition ef:agent/enrich_references ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v8 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v9
ef:activity/change/20260821T1554374006150000/237412 references ef:agent/enrich_references ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v9 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v10
ef:activity/change/20260821T1554374006150000/255894 altLabel ef:agent/chebi_altlabels ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v10 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v11
ef:activity/change/20260821T1554374006150000/263989 altLabel ef:agent/consensus_match ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v11 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v12
ef:activity/change/20260821T1554374006150000/263990 cas_match_labels ef:agent/consensus_match ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v12 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v13
ef:activity/change/20260821T1554374006150000/276436 properties ef:agent/opsin_iupac ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v13 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v14
ef:activity/change/20260821T1554374006150000/283041 properties ef:agent/rdkit_post_consensus ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v14 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v15
ef:activity/change/20260821T1554374006150000/289486 altLabel ef:agent/strip_catalogue_altlabels ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v15 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v16
ef:activity/change/20260821T1554374006150000/360231 concept_associations ef:agent/carry_associations_onto_flows ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v16 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v17
ef:activity/change/20260821T1554374006150000/390791 properties ef:agent/normalise_property_values ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v17 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v18
ef:activity/change/20260821T1554374006150000/398561 types ef:agent/link_flows_to_their_substance ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v18 ef:flow/b6f2aea3-4e3a-46c4-ac29-7d503027c1ad/v19

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