Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 60643' (registry code)
cas_match_labels 1 consensus_match group_key=1,2-dibromobenzene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'583-53-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7f0faa50e413a27a: {'583-53-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['583-53-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_37152']; candidate_pubchem_cids=[10484, 11414]; selected_pubchem_cids=[11414]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,201 bootstrap_labels prefLabel [{"@value":"1,2-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
10,202 bootstrap_labels name 1,2-dibromobenzene Purged legacy name field to enforce prefLabel usage
15,066 bootstrap_labels synonyms ["AC1L1XB1","AKOS000121579","BENZENE,1,2-DIBROMO","Benzene, 1,2-dibromo-","Benzene, dibromo-","Benzene, o-dibromo-","Be… [] Removed legacy synonyms field in favor of structured labels
159,196 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
159,197 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
216,726 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
236,915 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
236,916 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
236,917 enrich_references references [] [{"@id":"beilstein:970241","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['583-53-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_37152']; candidate_pubchem_cids=[10484, 11414]; selected_pubchem_cids=[11414]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,116 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… rdkit_pre_consensus from 'Brc1ccccc1Br'; added: monoisotopic_mass
255,828 chebi_altlabels altLabel [] [{"@value":"o-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
258,371 consensus_match altLabel [{"@value":"o-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"o-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=1,2-dibromobenzene||dimension=Environmental > media=Air > indoor=Unknown; cas=583-53-9; added Common Chemistry CAS names as altLabel: Benzene, 1,2-dibromo-, Benzene, <em>o</em>-dibromo-, NSC 60643; object_uuid=fo-7f0faa50e413a27a
258,372 consensus_match cas_match_labels {"583-53-9":"exactMatch"} group_key=1,2-dibromobenzene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'583-53-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7f0faa50e413a27a: {'583-53-9': 'exactMatch'}
276,299 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1,2-dibromobenzene'
282,887 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… rdkit_post_consensus from 'Brc1ccccc1Br'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,370 strip_catalogue_altlabels altLabel [{"@value":"o-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"o-dibromobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 1 catalogue altLabel value(s): 'NSC 60643' (registry code)
360,615 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/b84d28c0-0346-… associations resolved on the elementary layer
390,638 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H4Br2"],… typed the way the ontology types it
398,337 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/10201 prefLabel ef:agent/bootstrap_labels ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v0 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v1
ef:activity/change/20260820T1812399309960000/10202 name ef:agent/bootstrap_labels ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v1 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v2
ef:activity/change/20260820T1812399309960000/15066 synonyms ef:agent/bootstrap_labels ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v2 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v3
ef:activity/change/20260820T1812399309960000/159196 context ef:agent/default_context_mapping ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v3 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v4
ef:activity/change/20260820T1812399309960000/159197 context_iri ef:agent/default_context_mapping ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v4 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v5
ef:activity/change/20260820T1812399309960000/216726 unit_iri ef:agent/unit_normalization ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v5 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v6
ef:activity/change/20260820T1812399309960000/236915 properties ef:agent/enrich_references ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v6 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v7
ef:activity/change/20260820T1812399309960000/236916 skos_definition ef:agent/enrich_references ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v7 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v8
ef:activity/change/20260820T1812399309960000/236917 references ef:agent/enrich_references ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v8 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v9
ef:activity/change/20260820T1812399309960000/251116 properties ef:agent/rdkit_pre_consensus ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v9 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v10
ef:activity/change/20260820T1812399309960000/255828 altLabel ef:agent/chebi_altlabels ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v10 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v11
ef:activity/change/20260820T1812399309960000/258371 altLabel ef:agent/consensus_match ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v11 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v12
ef:activity/change/20260820T1812399309960000/258372 cas_match_labels ef:agent/consensus_match ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v12 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v13
ef:activity/change/20260820T1812399309960000/276299 properties ef:agent/opsin_iupac ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v13 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v14
ef:activity/change/20260820T1812399309960000/282887 properties ef:agent/rdkit_post_consensus ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v14 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v15
ef:activity/change/20260820T1812399309960000/289370 altLabel ef:agent/strip_catalogue_altlabels ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v15 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v16
ef:activity/change/20260820T1812399309960000/360615 concept_associations ef:agent/carry_associations_onto_flows ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v16 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v17
ef:activity/change/20260820T1812399309960000/390638 properties ef:agent/normalise_property_values ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v17 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v18
ef:activity/change/20260820T1812399309960000/398337 types ef:agent/link_flows_to_their_substance ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v18 ef:flow/b84d28c0-0346-43fd-bb2d-d5a0810f59c4/v19

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