5-phenylvaleric Acid
Everything that changed this flow. Back to the flow
ba5417ed-effc-4175-86cb-b916c4d624a0
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 65637' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=5-phenylvalericacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2270-20-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fcc1fe854521d2b7: {'2270-20-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['2270-20-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_40131']; candidate_pubchem_cids=[16757]; selected_pubchem_cids=[16757]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 14,106 | bootstrap_labels | prefLabel | — | [{"@value":"5-phenylvaleric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… | Bootstrapped prefLabel from legacy name field |
| 14,107 | bootstrap_labels | name | 5-phenylvaleric acid | — | Purged legacy name field to enforce prefLabel usage |
| 14,108 | bootstrap_labels | synonyms | ["2ay9","5-PHENYLPENTANOIC ACID","5-Phenylvalerate","5PV","AC1L28MF","AC1Q75EZ","AKOS003238607","BYHDDXPKOZIZRV-UHFFFAO… | [] | Removed legacy synonyms field in favor of structured labels |
| 160,326 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 160,327 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified (long-term) |
| 217,997 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,351 | normalize_name_case | prefLabel | [{"@value":"5-phenylvaleric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… | [{"@value":"5-phenylvaleric Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 240,535 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 240,536 | enrich_references | skos_definition | — | [{"@value":"A monocarboxylic acid that is valeric acid substituted by a phenyl group at the δ-position.","@language":"e… | Merged ChEBI/PubChem definitions into skos:definition |
| 240,537 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J168F","provenance":{"prov:wasGeneratedBy":"enrich_references.… | Added references with provenance; cas_numbers=['2270-20-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_40131']; candidate_pubchem_cids=[16757]; selected_pubchem_cids=[16757]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 256,281 | chebi_altlabels | altLabel | [] | [{"@value":"5-phenylpentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,158 | consensus_match | altLabel | [{"@value":"5-phenylpentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | [{"@value":"5-phenylpentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | group_key=5-phenylvalericacid||dimension=Environmental > media=Water > water_body=Ocean; cas=2270-20-4; added Common Chemistry CAS names as altLabel: Benzenepentanoic acid, NSC 65637, Valeric acid, 5-phenyl-, Valeric acid, δ-phenyl-, δ-Phenylvaleric acid; object_uuid=fo-fcc1fe854521d2b7 |
| 263,159 | consensus_match | cas_match_labels | — | {"2270-20-4":"exactMatch"} | group_key=5-phenylvalericacid||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'2270-20-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fcc1fe854521d2b7: {'2270-20-4': 'exactMatch'} |
| 277,353 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-phenylvaleric Acid' |
| 284,032 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | rdkit_post_consensus from 'O=C(O)CCCCc1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,146 | strip_catalogue_altlabels | altLabel | [{"@value":"5-phenylpentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | [{"@value":"5-phenylpentanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribu… | Removed 1 catalogue altLabel value(s): 'NSC 65637' (registry code) |
| 361,187 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/ba5417ed-effc-… | associations resolved on the elementary layer |
| 391,711 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H14O2"]… | typed the way the ontology types it |
| 399,866 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/14106 | prefLabel | ef:agent/bootstrap_labels | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v0 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v1 |
| ef:activity/change/20260821T1554374006150000/14107 | name | ef:agent/bootstrap_labels | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v1 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v2 |
| ef:activity/change/20260821T1554374006150000/14108 | synonyms | ef:agent/bootstrap_labels | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v2 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v3 |
| ef:activity/change/20260821T1554374006150000/160326 | context | ef:agent/default_context_mapping | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v3 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v4 |
| ef:activity/change/20260821T1554374006150000/160327 | context_iri | ef:agent/default_context_mapping | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v4 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v5 |
| ef:activity/change/20260821T1554374006150000/217997 | unit_iri | ef:agent/unit_normalization | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v5 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v6 |
| ef:activity/change/20260821T1554374006150000/224351 | prefLabel | ef:agent/normalize_name_case | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v6 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v7 |
| ef:activity/change/20260821T1554374006150000/240535 | properties | ef:agent/enrich_references | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v7 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v8 |
| ef:activity/change/20260821T1554374006150000/240536 | skos_definition | ef:agent/enrich_references | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v8 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v9 |
| ef:activity/change/20260821T1554374006150000/240537 | references | ef:agent/enrich_references | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v9 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v10 |
| ef:activity/change/20260821T1554374006150000/256281 | altLabel | ef:agent/chebi_altlabels | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v10 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v11 |
| ef:activity/change/20260821T1554374006150000/263158 | altLabel | ef:agent/consensus_match | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v11 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v12 |
| ef:activity/change/20260821T1554374006150000/263159 | cas_match_labels | ef:agent/consensus_match | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v12 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v13 |
| ef:activity/change/20260821T1554374006150000/277353 | properties | ef:agent/opsin_iupac | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v13 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v14 |
| ef:activity/change/20260821T1554374006150000/284032 | properties | ef:agent/rdkit_post_consensus | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v14 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v15 |
| ef:activity/change/20260821T1554374006150000/290146 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v15 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v16 |
| ef:activity/change/20260821T1554374006150000/361187 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v16 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v17 |
| ef:activity/change/20260821T1554374006150000/391711 | properties | ef:agent/normalise_property_values | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v17 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v18 |
| ef:activity/change/20260821T1554374006150000/399866 | types | ef:agent/link_flows_to_their_substance | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v18 | ef:flow/ba5417ed-effc-4175-86cb-b916c4d624a0/v19 |