Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 76227' (registry code)
cas_match_labels 1 consensus_match group_key=1,2,4-triazolyl-3-alanine||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10109-05-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ce5067fd3f34a9f2: {'10109-05-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['10109-05-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_9675']; candidate_pubchem_cids=[70501, 92235, 40584731]; selected_pubchem_cids=[92235]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
5,674 bootstrap_labels prefLabel [{"@value":"1,2,4-triazolyl-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAtt… Bootstrapped prefLabel from legacy name field
5,675 bootstrap_labels name 1,2,4-triazolyl-3-alanine Purged legacy name field to enforce prefLabel usage
5,676 bootstrap_labels synonyms ["organic","1,2,4-triazolyl-3-alanine"] [] Removed legacy synonyms field in favor of structured labels
161,014 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
161,015 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
215,234 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
232,640 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
232,641 enrich_references skos_definition [{"@value":"A non-proteinogenic α-amino acid that is alanine in which one of the methyl hydrogens is replaced by a 1,2,… Merged ChEBI/PubChem definitions into skos:definition
232,642 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J227.038B","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['10109-05-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_9675']; candidate_pubchem_cids=[70501, 92235, 40584731]; selected_pubchem_cids=[92235]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,887 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… rdkit_pre_consensus from 'C1=NNC(=N1)CC(C(=O)O)N'; added: monoisotopic_mass
255,092 chebi_altlabels altLabel [] [{"@value":"1,2,4-Triazole-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
258,293 consensus_match altLabel [{"@value":"1,2,4-Triazole-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"1,2,4-Triazole-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=1,2,4-triazolyl-3-alanine||dimension=Environmental > media=Water > water_body=Surface water; cas=10109-05-4; added Common Chemistry CAS names as altLabel: 1,2,4-Triazole-3-<span class="text-smallcaps">DL</span>-alanine, 1,2,4-Triazole-<span class="text-smallcaps">DL</span>-alanine, 1<em>H</em>-1,2,4-Triazole-3-propanoic acid, α-amino-, 1<em>H</em>-1,2,4-Triazole-5-propanoic acid, α-amino-, 2-Amino-3-(1<em>H</em>-1,2,4-triazol-5-yl)propanoic acid, 2-Amino-3-(4<em>H</em>-1,2,4-triazol-3-yl)propanoic acid, 3-(1,2,4-Triazol-3-yl)-<span class="text-smallcaps">D</span>,L-alanine, <em>s</em>-Triazole-3-alanine, <em>s</em>-Triazole-3-propionic acid, α-amino-, NSC 76227, α-Amino-1<em>H</em>-1,2,4-triazole-5-propanoic acid; object_uuid=fo-ce5067fd3f34a9f2
258,294 consensus_match cas_match_labels {"10109-05-4":"exactMatch"} group_key=1,2,4-triazolyl-3-alanine||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10109-05-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ce5067fd3f34a9f2: {'10109-05-4': 'exactMatch'}
275,022 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'alpha-Amino-1H-1,2,4-triazole-3-propanoic acid'
281,507 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… rdkit_post_consensus from 'NC(Cc1nc[nH]n1)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,404 strip_catalogue_altlabels altLabel [{"@value":"1,2,4-Triazole-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"1,2,4-Triazole-3-alanine","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Removed 1 catalogue altLabel value(s): 'NSC 76227' (registry code)
361,524 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/bb8dfbec-383f-… associations resolved on the elementary layer
389,325 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8N4O2"]… typed the way the ontology types it
396,422 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/5674 prefLabel ef:agent/bootstrap_labels ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v0 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v1
ef:activity/change/20260820T1812399309960000/5675 name ef:agent/bootstrap_labels ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v1 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v2
ef:activity/change/20260820T1812399309960000/5676 synonyms ef:agent/bootstrap_labels ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v2 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v3
ef:activity/change/20260820T1812399309960000/161014 context ef:agent/default_context_mapping ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v3 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v4
ef:activity/change/20260820T1812399309960000/161015 context_iri ef:agent/default_context_mapping ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v4 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v5
ef:activity/change/20260820T1812399309960000/215234 unit_iri ef:agent/unit_normalization ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v5 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v6
ef:activity/change/20260820T1812399309960000/232640 properties ef:agent/enrich_references ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v6 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v7
ef:activity/change/20260820T1812399309960000/232641 skos_definition ef:agent/enrich_references ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v7 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v8
ef:activity/change/20260820T1812399309960000/232642 references ef:agent/enrich_references ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v8 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v9
ef:activity/change/20260820T1812399309960000/249887 properties ef:agent/rdkit_pre_consensus ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v9 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v10
ef:activity/change/20260820T1812399309960000/255092 altLabel ef:agent/chebi_altlabels ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v10 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v11
ef:activity/change/20260820T1812399309960000/258293 altLabel ef:agent/consensus_match ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v11 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v12
ef:activity/change/20260820T1812399309960000/258294 cas_match_labels ef:agent/consensus_match ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v12 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v13
ef:activity/change/20260820T1812399309960000/275022 properties ef:agent/opsin_iupac ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v13 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v14
ef:activity/change/20260820T1812399309960000/281507 properties ef:agent/rdkit_post_consensus ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v14 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v15
ef:activity/change/20260820T1812399309960000/288404 altLabel ef:agent/strip_catalogue_altlabels ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v15 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v16
ef:activity/change/20260820T1812399309960000/361524 concept_associations ef:agent/carry_associations_onto_flows ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v16 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v17
ef:activity/change/20260820T1812399309960000/389325 properties ef:agent/normalise_property_values ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v17 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v18
ef:activity/change/20260820T1812399309960000/396422 types ef:agent/link_flows_to_their_substance ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v18 ef:flow/bb8dfbec-383f-46f2-95ae-a453263d270e/v19

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