Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=7783-18-8; cc_chebi_agreed_name='Ammonium thiosulfate'; object_uuid=fo-a494314e07543cc4
cas_match_labels 1 consensus_match group_key=diammoniumthiosulfate||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7783-18-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a494314e07543cc4: {'7783-18-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7783-18-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_147402']; candidate_pubchem_cids=[61480, 6096946, 6857883]; selected_pubchem_cids=[6096946]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

23
# Step Field From To Why
16,963 bootstrap_labels prefLabel [{"@value":"diammonium thiosulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Bootstrapped prefLabel from legacy name field
16,964 bootstrap_labels name diammonium thiosulfate Purged legacy name field to enforce prefLabel usage
16,965 bootstrap_labels synonyms ["inorganic","ammoniumthiosulphate"] [] Removed legacy synonyms field in favor of structured labels
161,444 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
161,445 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
218,908 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,979 normalize_name_case prefLabel [{"@value":"diammonium thiosulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Diammonium Thiosulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
243,120 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
243,121 enrich_references skos_definition [{"@value":"An inorganic ammonium salt composed of ammonium and thiosulfate ions in a 2:1 ratio. It is used in the leac… Merged ChEBI/PubChem definitions into skos:definition
243,122 enrich_references references [] [{"@id":"agr:IND20486122","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['7783-18-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_147402']; candidate_pubchem_cids=[61480, 6096946, 6857883]; selected_pubchem_cids=[6096946]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,913 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… rdkit_pre_consensus from 'O=S(=O)([O-])[S-].[NH4+].[NH4+]'; added: monoisotopic_mass
256,628 chebi_altlabels altLabel [] [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,698 consensus_match prefLabel [{"@value":"Diammonium Thiosulfate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… [{"@value":"Ammonium thiosulfate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttribute… cas=7783-18-8; cc_chebi_agreed_name='Ammonium thiosulfate'; object_uuid=fo-a494314e07543cc4
265,699 consensus_match altLabel [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… cas=7783-18-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-a494314e07543cc4
265,700 consensus_match altLabel [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=diammoniumthiosulfate||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=7783-18-8; added Common Chemistry CAS names as altLabel: Ammonium thiosulfate ((NH<sub>4</sub>)<sub>2</sub>S<sub>2</sub>O<sub>3</sub>), Thiosulfuric acid (H<sub>2</sub>S<sub>2</sub>O<sub>3</sub>), ammonium salt (1:2), Thiosulfuric acid (H<sub>2</sub>S<sub>2</sub>O<sub>3</sub>), diammonium salt, Thiosulfuric acid, diammonium salt; object_uuid=fo-a494314e07543cc4
265,701 consensus_match cas_match_labels {"7783-18-8":"exactMatch"} group_key=diammoniumthiosulfate||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7783-18-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a494314e07543cc4: {'7783-18-8': 'exactMatch'}
278,133 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ammonium thiosulfate'
284,868 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… rdkit_post_consensus from 'O=S([O-])([O-])=S.[NH4+].[NH4+]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,928 dedupe_altlabels altLabel [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"ATS","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Deduplicated altLabel values and removed entries matching prefLabel
361,766 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/bc42dd1b-b821-… associations resolved on the elementary layer
392,487 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["2H4N.O3S2"… typed the way the ontology types it
400,974 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow
400,975 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

23 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/16963 prefLabel ef:agent/bootstrap_labels ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v0 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v1
ef:activity/change/20260820T0738569779880000/16964 name ef:agent/bootstrap_labels ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v1 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v2
ef:activity/change/20260820T0738569779880000/16965 synonyms ef:agent/bootstrap_labels ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v2 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v3
ef:activity/change/20260820T0738569779880000/161444 context ef:agent/default_context_mapping ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v3 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v4
ef:activity/change/20260820T0738569779880000/161445 context_iri ef:agent/default_context_mapping ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v4 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v5
ef:activity/change/20260820T0738569779880000/218908 unit_iri ef:agent/unit_normalization ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v5 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v6
ef:activity/change/20260820T0738569779880000/224979 prefLabel ef:agent/normalize_name_case ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v6 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v7
ef:activity/change/20260820T0738569779880000/243120 properties ef:agent/enrich_references ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v7 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v8
ef:activity/change/20260820T0738569779880000/243121 skos_definition ef:agent/enrich_references ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v8 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v9
ef:activity/change/20260820T0738569779880000/243122 references ef:agent/enrich_references ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v9 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v10
ef:activity/change/20260820T0738569779880000/252913 properties ef:agent/rdkit_pre_consensus ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v10 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v11
ef:activity/change/20260820T0738569779880000/256628 altLabel ef:agent/chebi_altlabels ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v11 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v12
ef:activity/change/20260820T0738569779880000/265698 prefLabel ef:agent/consensus_match ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v12 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v13
ef:activity/change/20260820T0738569779880000/265699 altLabel ef:agent/consensus_match ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v13 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v14
ef:activity/change/20260820T0738569779880000/265700 altLabel ef:agent/consensus_match ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v14 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v15
ef:activity/change/20260820T0738569779880000/265701 cas_match_labels ef:agent/consensus_match ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v15 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v16
ef:activity/change/20260820T0738569779880000/278133 properties ef:agent/opsin_iupac ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v16 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v17
ef:activity/change/20260820T0738569779880000/284868 properties ef:agent/rdkit_post_consensus ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v17 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v18
ef:activity/change/20260820T0738569779880000/292928 altLabel ef:agent/dedupe_altlabels ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v18 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v19
ef:activity/change/20260820T0738569779880000/361766 concept_associations ef:agent/carry_associations_onto_flows ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v19 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v20
ef:activity/change/20260820T0738569779880000/392487 properties ef:agent/normalise_property_values ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v20 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v21
ef:activity/change/20260820T0738569779880000/400974 types ef:agent/link_flows_to_their_substance ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v21 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v22
ef:activity/change/20260820T0738569779880000/400975 roles ef:agent/link_flows_to_their_substance ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v22 ef:flow/bc42dd1b-b821-43c4-988e-596199afa7f1/v23

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