(aminomethyl)phosphonic Acid
Everything that changed this flow. Back to the flow
bc8189e9-41e5-4eb3-9d51-18263a910095
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 30076' (registry code), 'Nalco 3919' (trade name) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=(aminomethyl)phosphonicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'pubchem']; cas_sources={'1066-51-9': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-76d794c41c381af3: {'1066-51-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['1066-51-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28812']; candidate_pubchem_cids=[14017, 158397, 5245512]; selected_pubchem_cids=[14017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,054 | bootstrap_labels | prefLabel | — | [{"@value":"(aminomethyl)phosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:was… | Bootstrapped prefLabel from legacy name field |
| 1,055 | bootstrap_labels | name | (aminomethyl)phosphonic acid | — | Purged legacy name field to enforce prefLabel usage |
| 1,056 | bootstrap_labels | synonyms | ["organic"] | [] | Removed legacy synonyms field in favor of structured labels |
| 161,584 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 161,585 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 213,692 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,345 | normalize_name_case | prefLabel | [{"@value":"(aminomethyl)phosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:was… | [{"@value":"(aminomethyl)phosphonic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:was… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 228,191 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 228,192 | enrich_references | skos_definition | — | [{"@value":"A member of the class of phosphonic acids that is phosphonic acid substituted by an aminomethyl group. It i… | Merged ChEBI/PubChem definitions into skos:definition |
| 228,193 | enrich_references | references | [] | [{"@id":"gmelin:793599","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… | Added references with provenance; cas_numbers=['1066-51-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_28812']; candidate_pubchem_cids=[14017, 158397, 5245512]; selected_pubchem_cids=[14017]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,517 | chebi_altlabels | altLabel | [] | [{"@value":"1-Aminomethylphosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 257,829 | consensus_match | altLabel | [{"@value":"1-Aminomethylphosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"1-Aminomethylphosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | group_key=(aminomethyl)phosphonicacid||dimension=Environmental > media=Air > strata=Long-term; cas=1066-51-9; added Common Chemistry CAS names as altLabel: <em>P</em>-(Aminomethyl)phosphonic acid, AMPA (surfactant), Aminomethanephosphonic acid, NSC 30076, Nalco 3919, Phosphaglycine, Phosphonic acid, (aminomethyl)-, Phosphonic acid, <em>P</em>-(aminomethyl)-; object_uuid=fo-76d794c41c381af3 |
| 257,830 | consensus_match | cas_match_labels | — | {"1066-51-9":"exactMatch"} | group_key=(aminomethyl)phosphonicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'pubchem']; cas_sources={'1066-51-9': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-76d794c41c381af3: {'1066-51-9': 'exactMatch'} |
| 273,750 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(aminomethyl)phosphonic Acid' |
| 280,125 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | rdkit_post_consensus from 'NCP(=O)(O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,488 | strip_catalogue_altlabels | altLabel | [{"@value":"1-Aminomethylphosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"1-Aminomethylphosphonic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Removed 2 catalogue altLabel value(s): 'NSC 30076' (registry code), 'Nalco 3919' (trade name) |
| 361,836 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/bc8189e9-41e5-… | associations resolved on the elementary layer |
| 388,029 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH6NO3P"],… | typed the way the ontology types it |
| 394,605 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/1054 | prefLabel | ef:agent/bootstrap_labels | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v0 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v1 |
| ef:activity/change/20260820T1416470405690000/1055 | name | ef:agent/bootstrap_labels | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v1 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v2 |
| ef:activity/change/20260820T1416470405690000/1056 | synonyms | ef:agent/bootstrap_labels | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v2 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v3 |
| ef:activity/change/20260820T1416470405690000/161584 | context | ef:agent/default_context_mapping | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v3 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v4 |
| ef:activity/change/20260820T1416470405690000/161585 | context_iri | ef:agent/default_context_mapping | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v4 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v5 |
| ef:activity/change/20260820T1416470405690000/213692 | unit_iri | ef:agent/unit_normalization | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v5 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v6 |
| ef:activity/change/20260820T1416470405690000/221345 | prefLabel | ef:agent/normalize_name_case | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v6 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v7 |
| ef:activity/change/20260820T1416470405690000/228191 | properties | ef:agent/enrich_references | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v7 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v8 |
| ef:activity/change/20260820T1416470405690000/228192 | skos_definition | ef:agent/enrich_references | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v8 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v9 |
| ef:activity/change/20260820T1416470405690000/228193 | references | ef:agent/enrich_references | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v9 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v10 |
| ef:activity/change/20260820T1416470405690000/254517 | altLabel | ef:agent/chebi_altlabels | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v10 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v11 |
| ef:activity/change/20260820T1416470405690000/257829 | altLabel | ef:agent/consensus_match | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v11 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v12 |
| ef:activity/change/20260820T1416470405690000/257830 | cas_match_labels | ef:agent/consensus_match | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v12 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v13 |
| ef:activity/change/20260820T1416470405690000/273750 | properties | ef:agent/opsin_iupac | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v13 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v14 |
| ef:activity/change/20260820T1416470405690000/280125 | properties | ef:agent/rdkit_post_consensus | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v14 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v15 |
| ef:activity/change/20260820T1416470405690000/287488 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v15 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v16 |
| ef:activity/change/20260820T1416470405690000/361836 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v16 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v17 |
| ef:activity/change/20260820T1416470405690000/388029 | properties | ef:agent/normalise_property_values | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v17 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v18 |
| ef:activity/change/20260820T1416470405690000/394605 | types | ef:agent/link_flows_to_their_substance | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v18 | ef:flow/bc8189e9-41e5-4eb3-9d51-18263a910095/v19 |