Neburon
Everything that changed this flow. Back to the flow
bdc2c6c4-c0ec-4594-9514-a06fc8190416
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=neburon||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'555-37-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f5afa50c8c06b781: {'555-37-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['555-37-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7491']; candidate_pubchem_cids=[11145]; selected_pubchem_cids=[11145]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 10,609 | bootstrap_labels | prefLabel | — | [{"@value":"neburon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 10,610 | bootstrap_labels | name | neburon | — | Purged legacy name field to enforce prefLabel usage |
| 10,611 | bootstrap_labels | synonyms | ["1-Butyl-3-(3,4-dichlorophenyl)-1-methylurea","1-n-BUTYL-3-(3,4-DICHLOROPHENYL)-1-METHYLUREA, TECH","1-n-Butyl-3-(3,4-… | [] | Removed legacy synonyms field in favor of structured labels |
| 162,294 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 162,295 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 216,858 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,576 | normalize_name_case | prefLabel | [{"@value":"neburon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Neburon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 237,283 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 237,284 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 237,285 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.619E","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['555-37-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7491']; candidate_pubchem_cids=[11145]; selected_pubchem_cids=[11145]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,215 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | rdkit_pre_consensus from 'CCCCN(C)C(=O)NC1=CC(=C(C=C1)Cl)Cl'; added: monoisotopic_mass |
| 255,882 | chebi_altlabels | altLabel | [] | [{"@value":"Kloben","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… | Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 269,793 | consensus_match | altLabel | [{"@value":"Kloben","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… | [{"@value":"Kloben","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… | group_key=neburon||dimension=Environmental > media=Water > water_body=Unknown; cas=555-37-3; added Common Chemistry CAS names as altLabel: 1-<em>n</em>-Butyl-3-(3,4-dichlorophenyl)-1-methylurea, 1-Butyl-3-(3,4-dichlorophenyl)-1-methylurea, 3-(3,4-Dichlorophenyl)-1-<em>n</em>-butyl-1-methylurea, 3-(3,4-Dichlorophenyl)-1-methyl-1-<em>n</em>-butylurea, 3-(3,4-Dichlorophenyl)-1-methyl-1-butylurea, <em>N</em>-(3,4-Dichlorophenyl)-<em>N</em>′-methyl-<em>N</em>′-butylurea, <em>N</em>-Butyl-<em>N</em>′-(3,4-dichlorophenyl)-<em>N</em>-methylurea, Kloben neburon, Neburea, Urea, 1-butyl-3-(3,4-dichlorophenyl)-1-methyl-, Urea, <em>N</em>-butyl-<em>N</em>′-(3,4-dichlorophenyl)-<em>N</em>-methyl-; object_uuid=fo-f5afa50c8c06b781 |
| 269,794 | consensus_match | cas_match_labels | — | {"555-37-3":"exactMatch"} | group_key=neburon||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'555-37-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-f5afa50c8c06b781: {'555-37-3': 'exactMatch'} |
| 276,400 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '1-n-Butyl-3-(3,4-dichlorophenyl)-1-methylurea' |
| 283,000 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | rdkit_post_consensus from 'CCCCN(C)C(=O)Nc1ccc(Cl)c(Cl)c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,520 | dedupe_altlabels | altLabel | [{"@value":"Kloben","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… | [{"@value":"Kloben","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensu… | Deduplicated altLabel values and removed entries matching prefLabel |
| 362,172 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/bdc2c6c4-c0ec-… | associations resolved on the elementary layer |
| 390,752 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H16Cl2N… | typed the way the ontology types it |
| 398,509 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/10609 | prefLabel | ef:agent/bootstrap_labels | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v0 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v1 |
| ef:activity/change/20260821T1554374006150000/10610 | name | ef:agent/bootstrap_labels | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v1 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v2 |
| ef:activity/change/20260821T1554374006150000/10611 | synonyms | ef:agent/bootstrap_labels | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v2 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v3 |
| ef:activity/change/20260821T1554374006150000/162294 | context | ef:agent/default_context_mapping | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v3 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v4 |
| ef:activity/change/20260821T1554374006150000/162295 | context_iri | ef:agent/default_context_mapping | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v4 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v5 |
| ef:activity/change/20260821T1554374006150000/216858 | unit_iri | ef:agent/unit_normalization | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v5 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v6 |
| ef:activity/change/20260821T1554374006150000/223576 | prefLabel | ef:agent/normalize_name_case | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v6 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v7 |
| ef:activity/change/20260821T1554374006150000/237283 | properties | ef:agent/enrich_references | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v7 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v8 |
| ef:activity/change/20260821T1554374006150000/237284 | skos_definition | ef:agent/enrich_references | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v8 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v9 |
| ef:activity/change/20260821T1554374006150000/237285 | references | ef:agent/enrich_references | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v9 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v10 |
| ef:activity/change/20260821T1554374006150000/251215 | properties | ef:agent/rdkit_pre_consensus | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v10 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v11 |
| ef:activity/change/20260821T1554374006150000/255882 | altLabel | ef:agent/chebi_altlabels | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v11 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v12 |
| ef:activity/change/20260821T1554374006150000/269793 | altLabel | ef:agent/consensus_match | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v12 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v13 |
| ef:activity/change/20260821T1554374006150000/269794 | cas_match_labels | ef:agent/consensus_match | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v13 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v14 |
| ef:activity/change/20260821T1554374006150000/276400 | properties | ef:agent/opsin_iupac | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v14 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v15 |
| ef:activity/change/20260821T1554374006150000/283000 | properties | ef:agent/rdkit_post_consensus | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v15 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v16 |
| ef:activity/change/20260821T1554374006150000/292520 | altLabel | ef:agent/dedupe_altlabels | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v16 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v17 |
| ef:activity/change/20260821T1554374006150000/362172 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v17 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v18 |
| ef:activity/change/20260821T1554374006150000/390752 | properties | ef:agent/normalise_property_values | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v18 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v19 |
| ef:activity/change/20260821T1554374006150000/398509 | types | ef:agent/link_flows_to_their_substance | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v19 | ef:flow/bdc2c6c4-c0ec-4594-9514-a06fc8190416/v20 |