Brucine
Everything that changed this flow. Back to the flow
be29641a-8065-4d0c-b9d1-4d2205aa59f7
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 2 | consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=brucine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'357-57-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-48d1afbb9658bce7: {'357-57-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['357-57-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3193']; candidate_pubchem_cids=[4870, 9649, 220520, 442021, 6978344, 11892995, 18528113, 51413923, 69897601, 71299747, 138107278]; selected_pubchem_cids=[442021]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 12,487 | bootstrap_labels | prefLabel | — | [{"@value":"brucine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Bootstrapped prefLabel from legacy name field |
| 12,488 | bootstrap_labels | name | brucine | — | Purged legacy name field to enforce prefLabel usage |
| 12,489 | bootstrap_labels | synonyms | ["(-)-Brucine","(8xi,12xi)-2,3-dimethoxystrychnidin-10-one","10,11-Dimethoxystrychnine","10,11-Dimethystrychnine","2,3-… | [] | Removed legacy synonyms field in favor of structured labels |
| 162,510 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Surface water"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 162,511 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-suwa | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 217,471 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,984 | normalize_name_case | prefLabel | [{"@value":"brucine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | [{"@value":"Brucine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"consen… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 239,042 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 239,043 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 239,044 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J5.693F","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['357-57-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_3193']; candidate_pubchem_cids=[4870, 9649, 220520, 442021, 6978344, 11892995, 18528113, 51413923, 69897601, 71299747, 138107278]; selected_pubchem_cids=[442021]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,726 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | rdkit_pre_consensus from 'COC1=C(C=C2C(=C1)C34CCN5C3CC6C7C4N2C(=O)CC7OCC=C6C5)OC'; added: inchi2d_string, monoisotopic_mass |
| 264,493 | consensus_match | altLabel | [] | [{"@value":"(-)-Brucine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | group_key=brucine||dimension=Environmental > media=Air > strata=Unknown; cas=357-57-3; added Common Chemistry CAS names as altLabel: (-)-Brucine, 2,3-Dimethoxystrychnidin-10-one, 2,3-Dimethoxystrychnine, 4,6-Methano-6<em>H</em>,14<em>H</em>-indolo[3,2,1-<em>ij</em>]oxepino[2,3,4-<em>de</em>]pyrrolo[2,3-<em>h</em>]quinoline, strychnidin-10-one deriv., <em>l</em>-Brucine, Strychnidin-10-one, 2,3-dimethoxy-; object_uuid=fo-48d1afbb9658bce7 |
| 264,494 | consensus_match | cas_match_labels | — | {"357-57-3":"exactMatch"} | group_key=brucine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'357-57-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-48d1afbb9658bce7: {'357-57-3': 'exactMatch'} |
| 283,561 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | rdkit_post_consensus from 'COC1=C(C=C2C(=C1)C34CCN5C3CC6C7C4N2C(=O)CC7OCC=C6C5)OC'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 292,634 | dedupe_altlabels | altLabel | [{"@value":"(-)-Brucine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | [{"@value":"(-)-Brucine","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | Deduplicated altLabel values and removed entries matching prefLabel |
| 362,280 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/be29641a-8065-… | associations resolved on the elementary layer |
| 391,271 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | typed the way the ontology types it |
| 399,230 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 399,231 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C23H26N2O4… | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/12487 | prefLabel | ef:agent/bootstrap_labels | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v0 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v1 |
| ef:activity/change/20260821T1554374006150000/12488 | name | ef:agent/bootstrap_labels | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v1 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v2 |
| ef:activity/change/20260821T1554374006150000/12489 | synonyms | ef:agent/bootstrap_labels | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v2 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v3 |
| ef:activity/change/20260821T1554374006150000/162510 | context | ef:agent/default_context_mapping | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v3 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v4 |
| ef:activity/change/20260821T1554374006150000/162511 | context_iri | ef:agent/default_context_mapping | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v4 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v5 |
| ef:activity/change/20260821T1554374006150000/217471 | unit_iri | ef:agent/unit_normalization | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v5 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v6 |
| ef:activity/change/20260821T1554374006150000/223984 | prefLabel | ef:agent/normalize_name_case | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v6 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v7 |
| ef:activity/change/20260821T1554374006150000/239042 | properties | ef:agent/enrich_references | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v7 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v8 |
| ef:activity/change/20260821T1554374006150000/239043 | skos_definition | ef:agent/enrich_references | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v8 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v9 |
| ef:activity/change/20260821T1554374006150000/239044 | references | ef:agent/enrich_references | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v9 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v10 |
| ef:activity/change/20260821T1554374006150000/251726 | properties | ef:agent/rdkit_pre_consensus | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v10 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v11 |
| ef:activity/change/20260821T1554374006150000/264493 | altLabel | ef:agent/consensus_match | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v11 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v12 |
| ef:activity/change/20260821T1554374006150000/264494 | cas_match_labels | ef:agent/consensus_match | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v12 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v13 |
| ef:activity/change/20260821T1554374006150000/283561 | properties | ef:agent/rdkit_post_consensus | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v13 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v14 |
| ef:activity/change/20260821T1554374006150000/292634 | altLabel | ef:agent/dedupe_altlabels | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v14 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v15 |
| ef:activity/change/20260821T1554374006150000/362280 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v15 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v16 |
| ef:activity/change/20260821T1554374006150000/391271 | properties | ef:agent/normalise_property_values | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v16 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v17 |
| ef:activity/change/20260821T1554374006150000/399230 | types | ef:agent/link_flows_to_their_substance | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v17 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v18 |
| ef:activity/change/20260821T1554374006150000/399231 | properties | ef:agent/link_flows_to_their_substance | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v18 | ef:flow/be29641a-8065-4d0c-b9d1-4d2205aa59f7/v19 |