Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 4 catalogue altLabel value(s): 'SAN 6602' (grade code), 'SAN 6915H' (grade code), 'SAN 7102' (grade code), 'SAN 7102H' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=metoxuron||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'19937-59-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3d1c3b4d76629e69: {'19937-59-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['19937-59-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6907']; candidate_pubchem_cids=[29863, 53420763]; selected_pubchem_cids=[29863]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
966 bootstrap_labels prefLabel [{"@value":"metoxuron","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Bootstrapped prefLabel from legacy name field
967 bootstrap_labels name metoxuron Purged legacy name field to enforce prefLabel usage
968 bootstrap_labels synonyms ["(3-Chloro-4-methoxyphenyl)-N,N-dimethylurea","(3-Chloro-4-methoxyphenyl)-N,N-dimethylurea (9CI)","3-(3-Chlor-4-methox… [] Removed legacy synonyms field in favor of structured labels
162,532 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
162,533 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
213,663 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,321 normalize_name_case prefLabel [{"@value":"metoxuron","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… [{"@value":"Metoxuron","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,105 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,106 enrich_references skos_definition [{"@value":"A member of the class of 3-(3,4-substituted-phenyl)-1,1-dimethylureas that is urea in which one of the nitr… Merged ChEBI/PubChem definitions into skos:definition
228,107 enrich_references references [] [{"@id":"agr:IND20624169","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['19937-59-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6907']; candidate_pubchem_cids=[29863, 53420763]; selected_pubchem_cids=[29863]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,585 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… rdkit_pre_consensus from 'CN(C)C(=O)NC1=CC(=C(C=C1)OC)Cl'; added: monoisotopic_mass
254,507 chebi_altlabels altLabel [] [{"@value":"(3-chloro-4-methoxyphenyl)-N,N-dimethylurea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
269,026 consensus_match altLabel [{"@value":"(3-chloro-4-methoxyphenyl)-N,N-dimethylurea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… [{"@value":"(3-chloro-4-methoxyphenyl)-N,N-dimethylurea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… group_key=metoxuron||dimension=Environmental > media=Water > water_body=Ocean; cas=19937-59-8; added Common Chemistry CAS names as altLabel: 1-(3-Chloro-4-methoxyphenyl)-3,3-dimethylurea, <em>N</em>-(3-Chloro-4-methoxyphenyl)-<em>N</em>′,<em>N</em>′-dimethylurea, <em>N</em>′-(3-Chloro-4-methoxyphenyl)-<em>N</em>,<em>N</em>-dimethylurea, Metoxuran, SAN 6602, SAN 7102, Urea, 3-(3-chloro-4-methoxyphenyl)-1,1-dimethyl-, Urea, <em>N</em>′-(3-chloro-4-methoxyphenyl)-<em>N</em>,<em>N</em>-dimethyl-; object_uuid=fo-3d1c3b4d76629e69
269,027 consensus_match cas_match_labels {"19937-59-8":"exactMatch"} group_key=metoxuron||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'19937-59-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3d1c3b4d76629e69: {'19937-59-8': 'exactMatch'}
273,727 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(3-chloro-4-methoxyphenyl)-N,N-dimethylurea'
280,100 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… rdkit_post_consensus from 'COc1ccc(NC(=O)N(C)C)cc1Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,470 strip_catalogue_altlabels altLabel [{"@value":"(3-chloro-4-methoxyphenyl)-N,N-dimethylurea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… [{"@value":"(3-chloro-4-methoxyphenyl)-N,N-dimethylurea","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlab… Removed 4 catalogue altLabel value(s): 'SAN 6602' (grade code), 'SAN 6915H' (grade code), 'SAN 7102' (grade code), 'SAN 7102H' (grade code)
362,313 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/be312b80-af62-… associations resolved on the elementary layer
388,006 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H13ClN2… typed the way the ontology types it
394,573 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,574 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/966 prefLabel ef:agent/bootstrap_labels ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v0 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v1
ef:activity/change/20260820T1555490862250000/967 name ef:agent/bootstrap_labels ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v1 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v2
ef:activity/change/20260820T1555490862250000/968 synonyms ef:agent/bootstrap_labels ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v2 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v3
ef:activity/change/20260820T1555490862250000/162532 context ef:agent/default_context_mapping ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v3 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v4
ef:activity/change/20260820T1555490862250000/162533 context_iri ef:agent/default_context_mapping ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v4 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v5
ef:activity/change/20260820T1555490862250000/213663 unit_iri ef:agent/unit_normalization ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v5 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v6
ef:activity/change/20260820T1555490862250000/221321 prefLabel ef:agent/normalize_name_case ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v6 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v7
ef:activity/change/20260820T1555490862250000/228105 properties ef:agent/enrich_references ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v7 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v8
ef:activity/change/20260820T1555490862250000/228106 skos_definition ef:agent/enrich_references ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v8 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v9
ef:activity/change/20260820T1555490862250000/228107 references ef:agent/enrich_references ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v9 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v10
ef:activity/change/20260820T1555490862250000/248585 properties ef:agent/rdkit_pre_consensus ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v10 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v11
ef:activity/change/20260820T1555490862250000/254507 altLabel ef:agent/chebi_altlabels ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v11 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v12
ef:activity/change/20260820T1555490862250000/269026 altLabel ef:agent/consensus_match ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v12 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v13
ef:activity/change/20260820T1555490862250000/269027 cas_match_labels ef:agent/consensus_match ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v13 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v14
ef:activity/change/20260820T1555490862250000/273727 properties ef:agent/opsin_iupac ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v14 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v15
ef:activity/change/20260820T1555490862250000/280100 properties ef:agent/rdkit_post_consensus ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v15 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v16
ef:activity/change/20260820T1555490862250000/287470 altLabel ef:agent/strip_catalogue_altlabels ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v16 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v17
ef:activity/change/20260820T1555490862250000/362313 concept_associations ef:agent/carry_associations_onto_flows ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v17 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v18
ef:activity/change/20260820T1555490862250000/388006 properties ef:agent/normalise_property_values ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v18 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v19
ef:activity/change/20260820T1555490862250000/394573 types ef:agent/link_flows_to_their_substance ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v19 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v20
ef:activity/change/20260820T1555490862250000/394574 roles ef:agent/link_flows_to_their_substance ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v20 ef:flow/be312b80-af62-4609-bd7f-6292e3b9f87f/v21

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